tools_iuc.not-installable-revisions.yaml

tools:
- name: abricate
  owner: iuc
  revisions:
  - b734db305578
- name: annotatemyids
  owner: iuc
  revisions:
  - 9ab35a2245ce
  - b467a89be0c6
- name: bakta
  owner: iuc
  revisions:
  - debdc1469b41
- name: busco
  owner: iuc
  revisions:
  - 2a5b8b9936bf
- name: compleasm
  owner: iuc
  revisions:
  - 07a74537acd5
  - 79413aecc398
- name: evidencemodeler
  owner: iuc
  revisions:
  - eb9dc0a70506
- name: data_manager_deeparg
  owner: iuc
  revisions:
  - 50f4ff01d845
- name: exonerate
  owner: iuc
  revisions:
  - f48ed38dfddf
- name: fargene
  owner: iuc
  revisions:
  - 239ce9f24386
- name: fastani
  owner: iuc
  revisions:
  - 2c7ac12ad75a
- name: funannotate_annotate
  owner: iuc
  revisions:
  - d0336d67702b
- name: funannotate_clean
  owner: iuc
  revisions:
  - 5c09ad60911c
- name: funannotate_compare
  owner: iuc
  revisions:
  - b69c46064ec7
- name: funannotate_sort
  owner: iuc
  revisions:
  - cb84060ad1aa
- name: glimmer_build_icm
  owner: bgruening
  revisions:
  - 15ad71e21010
- name: glimmer_knowledge_based
  owner: bgruening
  revisions:
  - febc61f3c67d
- name: glimmer_not_knowledge_based
  owner: bgruening
  revisions:
  - 2529762847c3
- name: goenrichment
  owner: iuc
  revisions:
  - 5ace5c7d1a86
- name: tsebra
  owner: iuc
  revisions:
  - f124679db9df
- name: goseq
  owner: iuc
  revisions:
  - ade933eff007
- name: goslimmer
  owner: iuc
  revisions:
  - 294de027cb5d
- name: hamronize_summarize
  owner: iuc
  revisions:
  - 243c87f34f39
  - a84e3131ae6a
- name: hamronize_tool
  owner: iuc
  revisions:
  - 41c7e03b3eab
  - ec82fac4eb4b
- name: hmmer_alimask
  owner: iuc
  revisions:
  - 80c713789d13
  - b4dc65565864
- name: hmmer_hmmalign
  owner: iuc
  revisions:
  - 24fa8e890f08
  - b2453ee52845
- name: hmmer_hmmbuild
  owner: iuc
  revisions:
  - dc8860ba75d1
- name: hmmer_hmmconvert
  owner: iuc
  revisions:
  - 8d5ec58d2172
  - db8a5a3195e7
- name: hmmer_hmmemit
  owner: iuc
  revisions:
  - 9415f29a3926
  - 96b127c59e6a
- name: hmmer_hmmfetch
  owner: iuc
  revisions:
  - a28fd001de59
  - fb459c8fb2ba
- name: hmmer_jackhmmer
  owner: iuc
  revisions:
  - 6e27bb3f0fa6
- name: homer_gtf_to_annotations
  owner: iuc
  revisions:
  - 396cf2c12173
  - 8ebb6520eef4
  - debfd2838aca
- name: kofamscan
  owner: iuc
  revisions:
  - 23494763e39e
- name: lorikeet_spoligotype
  owner: iuc
  revisions:
  - f9c37d0b3002
- name: microsatbed
  owner: iuc
  revisions:
  - 2b970db61912
- name: miniprot
  owner: iuc
  revisions:
  - 52bdc302299b
- name: miniprot_index
  owner: iuc
  revisions:
  - 3ccb407501d8
- name: mitos
  owner: iuc
  revisions:
  - 1f4933f5a323
- name: omark
  owner: iuc
  revisions:
  - 9607b69326e1
- name: plasmidfinder
  owner: iuc
  revisions:
  - e23b96d79dc0
- name: red
  owner: iuc
  revisions:
  - 18a46265455b
- name: repeat_masker
  owner: bgruening
  revisions:
  - 72aade318318
  - d7540a923c7b
- name: repeatmodeler
  owner: csbl
  revisions:
  - dda44fd49bcd
  - fbe22cb3c869
- name: roary
  owner: iuc
  revisions:
  - 15ca041134a9
  - 78608ec02d62
  - e02e9af2743f
- name: staramr
  owner: iuc
  revisions:
  - 6edfb4b6db85
- name: tbprofiler
  owner: iuc
  revisions:
  - 2c68b0c38785
- name: tetyper
  owner: iuc
  revisions:
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- name: transtermhp
  owner: iuc
  revisions:
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  - 1a1ec22a7e28
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- name: abyss
  owner: iuc
  revisions:
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- name: bellerophon
  owner: iuc
  revisions:
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- name: bionano_scaffold
  owner: bgruening
  revisions:
  - 5d7c5ae1b69b
- name: colibread_lordec
  owner: iuc
  revisions:
  - 74878f127e47
- name: disco
  owner: iuc
  revisions:
  - 6d447ebb2bf4
- name: fastk_fastk
  owner: iuc
  revisions:
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- name: fastk_logex
  owner: iuc
  revisions:
  - 73ddd200456a
- name: fastk_histex
  owner: iuc
  revisions:
  - b897c5daf0ce
- name: getorganelle
  owner: iuc
  revisions:
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- name: hifiasm_meta
  owner: galaxy-australia
  revisions:
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- name: idba_hybrid
  owner: iuc
  revisions:
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- name: idba_tran
  owner: iuc
  revisions:
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- name: idba_ud
  owner: iuc
  revisions:
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- name: merqury
  owner: iuc
  revisions:
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- name: meryl
  owner: iuc
  revisions:
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- name: metaspades
  owner: nml
  revisions:
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- name: miniasm
  owner: iuc
  revisions:
  - 2dcd07f40204
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- name: pairtools_dedup
  owner: iuc
  revisions:
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  - ae537f4d4b93
- name: pairtools_parse
  owner: iuc
  revisions:
  - a98caf2d8309
- name: pairtools_split
  owner: iuc
  revisions:
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  - f4b5f58b89bf
- name: pairtools_sort
  owner: iuc
  revisions:
  - d392cfd963f4
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- name: pairtools_stats
  owner: iuc
  revisions:
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- name: pretext_graph
  owner: iuc
  revisions:
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- name: pretext_map
  owner: iuc
  revisions:
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- name: quast
  owner: iuc
  revisions:
  - f30d03867854
- name: ragtag
  owner: iuc
  revisions:
  - a04e64efa43a
- name: raven
  owner: iuc
  revisions:
  - 5c55448d0f33
- name: rnaquast
  owner: iuc
  revisions:
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- name: rnaspades
  owner: iuc
  revisions:
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- name: shovill
  owner: iuc
  revisions:
  - 2a9baa0c4316
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- name: smudgeplot
  owner: galaxy-australia
  revisions:
  - 5a0ddb4dc3a4
- name: spades
  owner: nml
  revisions:
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- name: spades_biosyntheticspades
  owner: iuc
  revisions:
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- name: spades_coronaspades
  owner: iuc
  revisions:
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- name: spades_metaplasmidspades
  owner: iuc
  revisions:
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- name: spades_metaviralspades
  owner: iuc
  revisions:
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- name: spades_plasmidspades
  owner: iuc
  revisions:
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- name: spades_rnaviralspades
  owner: iuc
  revisions:
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- name: trycycler_cluster
  owner: iuc
  revisions:
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- name: trycycler_consensus
  owner: iuc
  revisions:
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- name: trycycler_partition
  owner: iuc
  revisions:
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- name: trycycler_reconcile_msa
  owner: iuc
  revisions:
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- name: trycycler_subsample
  owner: iuc
  revisions:
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- name: unicycler
  owner: iuc
  revisions:
  - 2db911a4efc5
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- name: bedtools
  owner: iuc
  revisions:
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  - 7ab85ac5f64b
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- name: bbgbigwig
  owner: iuc
  revisions:
  - b95435276746
- name: bam_to_scidx
  owner: iuc
  revisions:
  - b737f6d83f48
- name: bax2bam
  owner: iuc
  revisions:
  - 4445939cacc9
- name: bioext_bam2msa
  owner: iuc
  revisions:
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- name: biom_convert
  owner: iuc
  revisions:
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- name: crossmap_bam
  owner: iuc
  revisions:
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- name: crossmap_bed
  owner: iuc
  revisions:
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- name: crossmap_gff
  owner: iuc
  revisions:
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- name: crossmap_vcf
  owner: iuc
  revisions:
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- name: crossmap_wig
  owner: iuc
  revisions:
  - 3cb69f2ecea2
- name: genebed_maf_to_fasta
  owner: iuc
  revisions:
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- name: gtftobed12
  owner: iuc
  revisions:
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- name: intermine_galaxy_exchange
  owner: iuc
  revisions:
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- name: interval2maf
  owner: iuc
  revisions:
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- name: resize_coordinate_window
  owner: iuc
  revisions:
  - 541f300f322d
- name: samtools_bam_to_cram
  owner: iuc
  revisions:
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- name: ucsc_twobittofa
  owner: iuc
  revisions:
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- name: ucsc_netfilter
  owner: iuc
  revisions:
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- name: emboss_5
  owner: devteam
  revisions:
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- name: bwameth
  owner: iuc
  revisions:
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- name: moabs
  owner: iuc
  revisions:
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- name: codeml
  owner: iuc
  revisions:
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- name: iqtree
  owner: iuc
  revisions:
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- name: quicktree
  owner: iuc
  revisions:
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- name: structure
  owner: iuc
  revisions:
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- name: fraggenescan
  owner: iuc
  revisions:
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- name: bbtools_bbmerge
  owner: iuc
  revisions:
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- name: bbtools_tadpole
  owner: iuc
  revisions:
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- name: cutadapt
  owner: lparsons
  revisions:
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- name: fasta_clipping_histogram
  owner: devteam
  revisions:
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- name: fasta_compute_length
  owner: devteam
  revisions:
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- name: fasta_filter_by_length
  owner: devteam
  revisions:
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- name: fasta_formatter
  owner: devteam
  revisions:
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- name: fasta_merge_files_and_filter_unique_sequences
  owner: galaxyp
  revisions:
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- name: fasta_nucleotide_changer
  owner: devteam
  revisions:
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- name: fasta_stats
  owner: iuc
  revisions:
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- name: fastq_combiner
  owner: devteam
  revisions:
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- name: fastq_filter
  owner: devteam
  revisions:
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- name: fastq_groomer
  owner: devteam
  revisions:
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- name: fastq_manipulation
  owner: devteam
  revisions:
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- name: fastq_masker_by_quality
  owner: devteam
  revisions:
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- name: fastq_paired_end_deinterlacer
  owner: devteam
  revisions:
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- name: fastq_paired_end_interlacer
  owner: devteam
  revisions:
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- name: fastq_paired_end_joiner
  owner: devteam
  revisions:
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- name: fastq_paired_end_splitter
  owner: devteam
  revisions:
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- name: fastq_quality_boxplot
  owner: devteam
  revisions:
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- name: fastq_quality_converter
  owner: devteam
  revisions:
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  owner: devteam
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- name: fastq_stats
  owner: devteam
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- name: fastq_to_fasta
  owner: devteam
  revisions:
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- name: fastq_to_tabular
  owner: devteam
  revisions:
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- name: fastq_trimmer
  owner: devteam
  revisions:
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- name: falco
  owner: iuc
  revisions:
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- name: fastqc
  owner: devteam
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- name: fastqe
  owner: iuc
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- name: fastqtofasta
  owner: devteam
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- name: fastx_artifacts_filter
  owner: devteam
  revisions:
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- name: fastx_barcode_splitter
  owner: devteam
  revisions:
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- name: fastx_clipper
  owner: devteam
  revisions:
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- name: fastx_collapser
  owner: devteam
  revisions:
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- name: fastx_nucleotides_distribution
  owner: devteam
  revisions:
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- name: fastx_quality_statistics
  owner: devteam
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- name: fastx_renamer
  owner: devteam
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- name: fastx_reverse_complement
  owner: devteam
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- name: fastx_trimmer
  owner: devteam
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- name: filtlong
  owner: iuc
  revisions:
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- name: flash
  owner: iuc
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- name: ncbi_fcs_gx
  owner: iuc
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- name: seqkit_fx2tab
  owner: iuc
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- name: seqkit_head
  owner: iuc
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  owner: iuc
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  owner: iuc
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  owner: iuc
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- name: seqtk
  owner: iuc
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- name: tabular_to_fastq
  owner: devteam
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- name: umi_tools_count
  owner: iuc
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- name: gffcompare
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- name: gemini_interactions
  owner: iuc
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- name: gemini_load
  owner: iuc
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- name: gemini_lof_sieve
  owner: iuc
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- name: gemini_pathways
  owner: iuc
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- name: gemini_qc
  owner: iuc
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- name: gemini_query
  owner: iuc
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  owner: iuc
  revisions:
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- name: gemini_set_somatic
  owner: iuc
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- name: gemini_stats
  owner: iuc
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- name: gemini_windower
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