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Bug: shape mismatch in init_mask when assigning template to X[cmask] #2

@dumbgoos

Description

@dumbgoos

Bug: shape mismatch in init_mask when assigning template to X[cmask]

Summary
During training, we intermittently hit a shape mismatch when writing template into X[cmask].

Command

python train.py --task struct_prediction  --gpus 0 1 2 3  --wandb_offline 1  --flexible 1  --model_type dyAb  --ex_name dyAb_struct_pred_2  --module_type 1  --batch_size 64

Error (exact)
RuntimeError: shape mismatch: value tensor of shape [4411, 14, 3] cannot be broadcast to indexing result of shape [4413, 14, 3]
[rank: 3] Child process with PID 2759890 terminated with code 1. Forcefully terminating all other processes to avoid zombies 🧟
Killed

Where
.../models/dyMEAN/dyAb_model.py, in init_mask:
X[cmask] = template

Context

  • 4×GPU DDP
  • struct_only=True
  • Occasionally cmask.sum()template.size(0) (diff by a small number).

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