Merge pull request #589 from ACCESS-NRI/547-dev-MC_25km_jra_ryf

Use 2025.05.001 build using oneapi compiler

Author: anton-seaice

config.yaml

@@ -14,25 +14,25 @@ jobfs: 10GB
 mem: 8000GB
 
 walltime: 24:00:00
-jobname: 025deg_jra55do_ryf
+jobname: 025km_jra55do_ryf
 
 model: access-om3
 
 exe: access-om3-MOM6-CICE6
 input:
     - /g/data/vk83/prerelease/configurations/inputs/access-om3/cice/grids/global.25km/2025.05.15/kmt.nc
     - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/mosaic/global.25km/2025.05.15/ocean_hgrid.nc
-    - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/global.025deg/2025.03.12/ocean_vgrid.nc
-    - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/initial_conditions/global.025deg/2025.03.19/ocean_temp_salt.res.nc
-    - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/surface_salt_restoring/global.025deg/2025.01.30/salt_sfc_restore.nc
+    - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/global.25km/2025.03.12/ocean_vgrid.nc
+    - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/initial_conditions/global.25km/2025.03.19/ocean_temp_salt.res.nc
+    - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/surface_salt_restoring/global.25km/2025.01.30/salt_sfc_restore.nc
     - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.25km/2025.05.15/bottom_roughness.nc
     - /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.25km/2025.05.15/tideamp.nc
     - /g/data/vk83/prerelease/configurations/inputs/access-om3/share/grids/global.25km/2025.05.15/topog.nc
-    - /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-025deg-ESMFmesh.nc
-    - /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-025deg-nomask-ESMFmesh.nc
+    - /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-25km-ESMFmesh.nc
+    - /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-25km-nomask-ESMFmesh.nc
     - /g/data/vk83/configurations/inputs/access-om3/share/meshes/share/2024.09.16/JRA55do-datm-ESMFmesh.nc
     - /g/data/vk83/configurations/inputs/access-om3/share/meshes/share/2024.09.16/JRA55do-drof-ESMFmesh.nc
-    - /g/data/vk83/prerelease/configurations/inputs/access-om3/cmeps/remap_weights/global.25km/2025.05.15/access-om3-025deg-rof-remap-weights.nc
+    - /g/data/vk83/prerelease/configurations/inputs/access-om3/cmeps/remap_weights/global.25km/2025.05.15/access-om3-25km-rof-remap-weights.nc
     - /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data
 
 runlog: false
@@ -60,7 +60,7 @@ modules:
     use:
         - /g/data/vk83/modules
     load:
-        - access-om3/2025.01.2
+        - access-om3/2025.05.001
         - nco/5.0.5
 
 payu_minimum_version: 1.1.6

datm_in

@@ -8,8 +8,8 @@
   flds_preso3 = .false.
   flds_wiso = .false.
   iradsw = 1
-  model_maskfile = "./INPUT/access-om3-025deg-nomask-ESMFmesh.nc"
-  model_meshfile = "./INPUT/access-om3-025deg-nomask-ESMFmesh.nc"
+  model_maskfile = "./INPUT/access-om3-25km-nomask-ESMFmesh.nc"
+  model_meshfile = "./INPUT/access-om3-25km-nomask-ESMFmesh.nc"
   nx_global = 1440
   ny_global = 1142
   restfilm = "null"

drof_in

@@ -1,7 +1,7 @@
 &drof_nml
   datamode = "copyall"
-  model_maskfile = "./INPUT/access-om3-025deg-nomask-ESMFmesh.nc"
-  model_meshfile = "./INPUT/access-om3-025deg-nomask-ESMFmesh.nc"
+  model_maskfile = "./INPUT/access-om3-25km-nomask-ESMFmesh.nc"
+  model_meshfile = "./INPUT/access-om3-25km-nomask-ESMFmesh.nc"
   nx_global = 1440
   ny_global = 1142
   restfilm = "null"

ice_in

@@ -24,6 +24,7 @@
   grid_ice = "B"
   grid_ocn = "A"
   grid_type = "tripole"
+  grid_outfile = .true.
   kcatbound = 0
   kmt_file = "./INPUT/kmt.nc"
   nblyr = 1

manifests/exe.yaml

@@ -2,7 +2,7 @@ format: yamanifest
 version: 1.0
 ---
 work/access-om3-MOM6-CICE6:
-  fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-2021.10.0/access-om3-nuopc-git.0.4.1_0.4.1-da4dcqojvm4siufkyf3fifawf5tpjlfu/bin/access-om3-MOM6-CICE6
+  fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64_v4/oneapi-2025.0.4/access3-2025.03.1-3joxy64tlxmkt66pxhpw6gydxfnd7fvl/bin/access-om3-MOM6-CICE6
   hashes:
-    binhash: 4e921c28f229aa272c853de61e34cb99
-    md5: 23e5622d1f50742e07554ebdd8cb23b3
+    binhash: 37359bf2f545a1dabd018143cbcde32a
+    md5: 6caef5a9389009d920c5ff90f5b13867

manifests/input.yaml

@@ -71,20 +71,20 @@ work/INPUT/RYF.vas.1990_1991.nc:
   hashes:
     binhash: d15ca562e37e82fb2d31657701f0a560
     md5: 88dc8c70338bbc8f5efc48ed0009a99f
-work/INPUT/access-om3-025deg-ESMFmesh.nc:
-  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-025deg-ESMFmesh.nc
+work/INPUT/access-om3-25km-ESMFmesh.nc:
+  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-25km-ESMFmesh.nc
   hashes:
-    binhash: 6730a85009a40b4fb9befcb33d72c7b0
+    binhash: 6c270b8ff1439b5797ccf597308a9c33
     md5: a98052c00d51f105615141ff2f961ad2
-work/INPUT/access-om3-025deg-nomask-ESMFmesh.nc:
-  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-025deg-nomask-ESMFmesh.nc
+work/INPUT/access-om3-25km-nomask-ESMFmesh.nc:
+  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/share/meshes/global.25km/2025.05.15/access-om3-25km-nomask-ESMFmesh.nc
   hashes:
-    binhash: 004a109477411495e4b83b0700de4cc6
+    binhash: 4eb3a5196deff02d0f365e3971706190
     md5: d9dd454a184ba0c48409e433b635a795
-work/INPUT/access-om3-025deg-rof-remap-weights.nc:
-  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/cmeps/remap_weights/global.25km/2025.05.15/access-om3-025deg-rof-remap-weights.nc
+work/INPUT/access-om3-25km-rof-remap-weights.nc:
+  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/cmeps/remap_weights/global.25km/2025.05.15/access-om3-25km-rof-remap-weights.nc
   hashes:
-    binhash: 72b02f07b141ec1471c7bd3d41498863
+    binhash: 57e0009f8526d84f603246a3b8bbeb28
     md5: 41657fc054785cc0e1741dd3639c3c16
 work/INPUT/bottom_roughness.nc:
   fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.25km/2025.05.15/bottom_roughness.nc
@@ -102,19 +102,19 @@ work/INPUT/ocean_hgrid.nc:
     binhash: 48eefda3750efba76d5180a356444415
     md5: e37b7499e33443c504c2873961ef3f8c
 work/INPUT/ocean_temp_salt.res.nc:
-  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/initial_conditions/global.025deg/2025.03.19/ocean_temp_salt.res.nc
+  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/initial_conditions/global.25km/2025.03.19/ocean_temp_salt.res.nc
   hashes:
-    binhash: 94b9748f0898ea25d0247c98762e8909
+    binhash: 51a70a96824d51fff7e389c0d0ebd9f5
     md5: a1b5711e7638521b0d73f648b7090650
 work/INPUT/ocean_vgrid.nc:
-  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/global.025deg/2025.03.12/ocean_vgrid.nc
+  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/grids/vertical/global.25km/2025.03.12/ocean_vgrid.nc
   hashes:
-    binhash: 1a0891515558b87f200786a9ac2f7132
+    binhash: 1c74a4ae036c70d30fbf49fe6b73483e
     md5: 66f71f2b24bd00b1c220787505e0106e
 work/INPUT/salt_sfc_restore.nc:
-  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/surface_salt_restoring/global.025deg/2025.01.30/salt_sfc_restore.nc
+  fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/surface_salt_restoring/global.25km/2025.01.30/salt_sfc_restore.nc
   hashes:
-    binhash: a5bf255da3f43e764cc25469bfe816e3
+    binhash: c0087207de3474818b4c70e06c675656
     md5: 6e37313d88f867af9f1d9f656ab633c9
 work/INPUT/tideamp.nc:
   fullpath: /g/data/vk83/prerelease/configurations/inputs/access-om3/mom/tidal_external_files/global.25km/2025.05.15/tideamp.nc

nuopc.runconfig

@@ -98,11 +98,11 @@ ALLCOMP_attributes::
      hostname = gadi
      ice_ncat = 5
      mediator_present = true
-     mesh_atm = ./INPUT/access-om3-025deg-nomask-ESMFmesh.nc
-     mesh_ice = ./INPUT/access-om3-025deg-ESMFmesh.nc
+     mesh_atm = ./INPUT/access-om3-25km-nomask-ESMFmesh.nc
+     mesh_ice = ./INPUT/access-om3-25km-ESMFmesh.nc
      mesh_lnd = UNSET
-     mesh_mask = ./INPUT/access-om3-025deg-ESMFmesh.nc
-     mesh_ocn = ./INPUT/access-om3-025deg-ESMFmesh.nc
+     mesh_mask = ./INPUT/access-om3-25km-ESMFmesh.nc
+     mesh_ocn = ./INPUT/access-om3-25km-ESMFmesh.nc
      model_version = unknown
      ocn2glc_coupling = .false.
      ocn2glc_levels = 1:10:19:26:30:33:35
@@ -249,8 +249,8 @@ MED_attributes::
      ocn_surface_flux_scheme = 0
      rof2lnd_map = unset
      rof2ocn_fmapname = unset
-     rof2ocn_ice_rmapname = ./INPUT/access-om3-025deg-rof-remap-weights.nc
-     rof2ocn_liq_rmapname = ./INPUT/access-om3-025deg-rof-remap-weights.nc
+     rof2ocn_ice_rmapname = ./INPUT/access-om3-25km-rof-remap-weights.nc
+     rof2ocn_liq_rmapname = ./INPUT/access-om3-25km-rof-remap-weights.nc
      rof_nx = 1440
      rof_ny = 1142
      wav2ocn_smapname = unset
@@ -302,7 +302,7 @@ OCN_attributes::
 
 ROF_attributes::
      Verbosity = off
-     mesh_rof = ./INPUT/access-om3-025deg-nomask-ESMFmesh.nc
+     mesh_rof = ./INPUT/access-om3-25km-nomask-ESMFmesh.nc
 ::
 
 MED_modelio::

nuopc.runseq

@@ -4,15 +4,13 @@ runSeq::
   MED med_phases_prep_ocn_accum
   MED med_phases_ocnalb_run
   MED med_phases_diag_ocn
-  MED med_phases_prep_ice
-  MED -> ICE :remapMethod=redist
   MED med_phases_prep_ocn_avg
   MED -> OCN :remapMethod=redist
+  OCN
+  MED med_phases_prep_ice
+  MED -> ICE :remapMethod=redist
   ICE
   ROF
-  OCN
-  OCN -> MED :remapMethod=redist
-  MED med_phases_post_ocn
   MED med_phases_diag_rof
   MED med_phases_diag_ice_ice2med
   ICE -> MED :remapMethod=redist
@@ -24,10 +22,12 @@ runSeq::
   MED med_phases_diag_ice_med2ice
   ROF -> MED :remapMethod=redist
   MED med_phases_post_rof
+  OCN -> MED :remapMethod=redist
+  MED med_phases_post_ocn
   MED med_phases_diag_accum
   MED med_phases_diag_print
-  MED med_phases_history_write        
-  MED med_phases_restart_write        
-  MED med_phases_profile              
-@ 
+  MED med_phases_history_write
+  MED med_phases_restart_write
+  MED med_phases_profile
+@
 ::

testing/checksum/historical-3hr-checksum.json

@@ -2,94 +2,94 @@
   "schema_version": "1-0-0",
   "output": {
     "Salt": [
-      "11C3AB3AC2A89B90"
+      "11AAE990CCD04FF2"
     ],
     "Temp": [
-      "32D0C1063EE09438"
+      "333090515A2A5F7F"
     ],
     "h": [
-      "5DF5CDD2793D166A"
+      "5DF62A8F4935BA82"
     ],
     "u": [
-      "7AC78199D3D4F1C4"
+      "F9E44BFBD64E02D2"
     ],
     "CAu": [
-      "E3120914F470DEC0"
+      "ED340B22B3DE11D2"
     ],
     "First_direction": [
       "0"
     ],
     "ave_ssh": [
-      "E5FF3050187E9E76"
+      "65D2AD9D59C9DD5E"
     ],
     "frazil": [
-      "5B9BD6478E535109"
+      "5CA3C164A204C459"
     ],
     "sfc": [
-      "E90F473E07B40D0A"
+      "E89FA353C65C6198"
     ],
     "u2": [
-      "C8A19B3FAF6D943A"
+      "431EF08F600B2889"
     ],
     "v": [
-      "4F6AADB0C39C9528"
+      "EF36CD035C52DE15"
     ],
     "v2": [
-      "DE006DFD0F03D9AA"
+      "EC21B78A3F61A950"
     ],
     "CAv": [
-      "E3312D15FCA3DE15"
+      "5037A5DB553B4C86"
     ],
     "DTBT": [
-      "4032D873E69959C9"
+      "4032D873E699055B"
     ],
     "MEKE": [
-      "D168265897CF0725"
+      "D15EE64E1413C367"
     ],
     "MEKE_Kh": [
-      "2278B4CD0A571CDD"
+      "2083216E9E2E9952"
     ],
     "age": [
-      "DBD9C8C9568B4B8D"
+      "6E081A3CE21623D0"
     ],
     "diffu": [
-      "D439A978D7D13639"
+      "4CC701FEDC50FE24"
     ],
     "diffv": [
-      "9E4384D4AA185048"
+      "533F0202D65E04EE"
     ],
     "ubtav": [
-      "41EA9E5E6D8FD941"
+      "C269EB61C88765BF"
     ],
     "vbtav": [
-      "93F8B21F33C4A2F2"
+      "140C67B5A1BAD97B"
     ],
     "Kd_shear": [
-      "CB65E530DCEADA41"
+      "F57411E89510BD4E"
     ],
     "Kv_shear": [
-      "BC26ABE3661E5A20"
+      "4CCED9346371EC2B"
     ],
     "Kv_shear_Bu": [
-      "E2CD6F42D417A2F6"
+      "A09D153F30A91434"
     ],
     "MLD": [
-      "176D82DA7598228F"
+      "16FABA526E7282DB"
     ],
     "MLD_MLE_filtered": [
-      "8D6756AA134FE82D"
+      "8D43D8B91E335218"
     ],
     "MLD_MLE_filtered_slow": [
-      "F6E213EA40082607"
+      "F6C5B776D2118B00"
     ],
     "MLE_Bflux": [
-      "DC9654BB92BBDAA9"
+      "DCA7F50A3F74E9C7"
     ],
     "SFC_BFLX": [
-      "1AD6BE83D8FBF452"
+      "1930DB9513B32510"
     ],
     "h_ML": [
-      "176D82DA7598228F"
+      "16FABA526E7282DB"
     ]
   }
 }