Library module updates

Author: kevinstratford

docs/software-libraries/hypre.md

@@ -26,6 +26,11 @@ environment if required.
 
 ### Version history
 
+=== "Upgrade 2025"
+
+    - module `hypre/2.33.0` added as non-default November 2025 (PE 23.09)
+    - module `hypre/2.25.0` installed as default May 2023 (PE 22.12)
+
 === "Upgrade 2023"
 
     - module `hypre/2.25.0` installed as default May 2023 (PE 22.12)
@@ -58,6 +63,4 @@ HYPRE [home page](https://computing.llnl.gov/projects/hypre-scalable-linear-solv
 
 The latest HYPRE [user manual](https://hypre.readthedocs.io/en/latest/) (HTML)
 
-An older [pdf version](https://computing.llnl.gov/sites/default/files/public/hypre-2.11.2_usr_manual.pdf)
-
 HYPRE [github repository](https://github.com/hypre-space/hypre)

docs/software-libraries/index.md

@@ -76,11 +76,6 @@ The following libraries will also made available by the ARCHER2 CSE team:
 
     AOCL (AMD Optimizing CPU Libraries) provides a set of numerical libraries optimised for AMD "Zen"-based processors. 
 
-- **ARPACK-NG** [*...details for ARPACK-NG on ARCHER2...*](arpack.md)
-
-    ARPACK-NG (Arnodli Package) computes eigenvalues and eigenvectors
-    of large sparse matrics.
-
 - **Boost** [*...details for Boost on ARCHER2...*](boost.md)
 
     Boost is a portable C++ library providing reference implementations
@@ -91,11 +86,6 @@ The following libraries will also made available by the ARCHER2 CSE team:
     Eigen is a C++ template library for linear algebra: matrices,
     vectors, numerical solvers, and related algorithms.
 
-- **GLM** [*...details for GLM on ARCHER2...*](glm.md)
-
-    GLM (GL Math library) is a C++ header-only library for performing
-    operations commonly encountered in graphics applications.
-
 - **Hypre** [*...details for HYPRE on ARCHER2...*](hypre.md)
 
     [HYPRE](https://hypre.readthedocs.io/en/latest/ch-intro.html)
@@ -141,11 +131,6 @@ The following libraries will also made available by the ARCHER2 CSE team:
 [800]: https://portal.nersc.gov/project/sparse/superlu/
 [810]: https://portal.nersc.gov/project/sparse/superlu/#superlu_dist
 
-- **Trilinos** [*...details for Trilinos on ARCHER2...*](trilinos.md)
-
-    [Trilinos](https://trilinos.github.io/) is a large collection of packages
-    for the solution of complex scientific and engineering problems.
-
 
 ### Integration with compiler environment
 

docs/software-libraries/mumps.md

@@ -27,6 +27,11 @@ installation for the current programming environment.
 
 ### Version history
 
+=== "Upgrade 2025"
+
+    - Module `mumps/5.8.1` added as non-default November 2025 (PE 23.09)
+    - Module `mumps/5.5.1` installed as default May 2023 (PE 22.12)
+
 === "Upgrade 2023"
 
     - Module `mumps/5.5.1` installed as default May 2023 (PE 22.12)
@@ -70,5 +75,5 @@ for further options and details.
 
 The [MUMPS home page](https://mumps-solver.org/index.php)
 
-MUMPS [user manual](https://mumps-solver.org/doc/userguide_5.6.0.pdf)
-(Version 5.6, pdf)
+MUMPS [user manual](https://mumps-solver.org/doc/userguide_5.8.1.pdf)
+(Version 5.8.1, pdf)

docs/software-libraries/petsc.md

@@ -26,6 +26,13 @@ root of the installation if this is required.
 
 ### Version history
 
+=== "Upgrade 2025"
+
+    - Module `petsc/3.24.1` added as non-default November 2025 (PE 23.09)
+    - Module `petsc/3.18.5` installed as default May 2023 (PE 22.12)
+
+    Note: `petsc/3.24.1` disables MUMPS support.
+
 === "Upgrade 2023"
 
     - Module `petsc/3.18.5` installed as default May 2023 (PE 22.12)

docs/software-libraries/scotch.md

@@ -41,6 +41,11 @@ user manuals for further details.
 
 ### Module version history
 
+=== "Upgrade 2025"
+
+    - Module `scotch/7.0.10` added as non-defualt November 2025 (PE 23.09)
+    - Module `scotch/7.0.3` installed as default May 2023 (PE 22.12)
+
 === "Upgrade 2023"
 
     - Module `scotch/7.0.3` installed May 2023 (PE 22.12)
@@ -89,7 +94,3 @@ separate script (`scotch.sh`) in the same location is used for version 6.
 ## Resources
 
 The [Scotch home page](https://www.labri.fr/perso/pelegrin/scotch/)
-
-Scotch [user manual](https://gforge.inria.fr/docman/view.php/248/8260/scotch_user6.0.pdf) (pdf)
-
-PT-Scotch [user manual](https://gforge.inria.fr/docman/view.php/248/8261/ptscotch_user6.0.pdf) (pdf)

docs/software-libraries/slepc.md

@@ -18,6 +18,11 @@ installation.
 
 ### Version history
 
+=== "Upgrade 2025"
+
+    - Module `slepc/3.24.0` added as non-default November 2025 (PE 23.09)
+    - Module `slepc/3.18.3` installed as default May 2023 (PE 22.12)
+
 === "Upgrade 2023"
 
     - Module `slepc/3.18.3` installed as default May 2023 (PE 22.12)

docs/software-libraries/superlu.md

@@ -30,6 +30,11 @@ location of the installation for a given programming environment.
 
 ### Version history
 
+=== "Upgrade 2025"
+
+    - Module `superlu/7.0.1` added as non-default November 2025 (PE 23.09)
+    - Module `superlu/5.2.2` recompiled May 2023 (PE 22.12) remains the default
+
 === "Upgrade 2023"
 
     - Module `superlu/5.2.2` recompiled May 2023 (PE 22.12)
@@ -67,6 +72,11 @@ as the root of the installation for the current programming environment.
 
 ### Version history
 
+=== "Upgrade 2025"
+
+    - Module `superlu-dist/9.0.1` added as non-default November 2025 (PE 23.09)
+    - Module `superlu-dist/8.1.2` installed as default May 2023 (PE 22.12)
+
 === "Upgrade 2023"
 
     - Module `superlu-dist/8.1.2` installed as default May 2023 (PE 22.12)

mkdocs.yml

@@ -104,12 +104,9 @@ nav:
     - "NetCDF": software-libraries/netcdf.md
     - "ADIOS2": software-libraries/adios.md
     - "AOCL": software-libraries/aocl.md
-    - "ARPACK": software-libraries/arpack.md
     - "Boost": software-libraries/boost.md
     - "Eigen": software-libraries/eigen.md
-    - "GLM":   software-libraries/glm.md
     - "HYPRE": software-libraries/hypre.md
-    - "Matio": software-libraries/matio.md
     - "Intel MKL": software-libraries/mkl.md
     - "MESA": software-libraries/mesa.md
     - "MUMPS": software-libraries/mumps.md
@@ -118,7 +115,6 @@ nav:
     - "Scotch/PT-Scotch": software-libraries/scotch.md
     - "SLEPc" : software-libraries/slepc.md
     - "SuperLU/SuperLU_DIST": software-libraries/superlu.md
-    - "Trilinos": software-libraries/trilinos.md
   - "Data Analysis and Tools":
     - "Overview": data-tools/index.md
     - "AMD uProf": data-tools/amd-uprof.md