Cpptraj Tests

Fix changes in the Amber gitlab that I accidentally overwrote (#1182) #613

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Run time

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Job	Run time
Build gnu with CMake 0	22m 58s
Build gnu with CMake 1	17m 8s
build-pytraj	9m 20s
Build gnu with CMake 0	27m 12s
Build clang with CMake 0	10m 2s
Build gnu with CMake 0	9m 48s
Build gnu with CMake 0	9m 26s
Build clang with CMake 1	6m 55s
Build gnu with CMake 1	6m 16s
	1h 59m 5s