Merge pull request #78 from openeyes/update-IOL-3.4

Update IOLMI to match 3.4 DB

Author: biskyt

src/resources/hibernate.cfg.xml

@@ -38,6 +38,7 @@
     <mapping class="uk.org.openeyes.models.EtOphinbiometryMeasurement"/>
     <mapping class="uk.org.openeyes.models.EtOphinbiometrySelection"/>
     <mapping class="uk.org.openeyes.models.EtOphinbiometryIolRefValues"/>
+    <mapping class="uk.org.openeyes.models.OphinbiometrySurgeon"/>
     <mapping class="uk.org.openeyes.models.OphinbiometryImportedEvents"/>
     <mapping class="uk.org.openeyes.models.OphinbiometryCalculationFormula"/>
     <mapping class="uk.org.openeyes.models.OphinbiometryLenstypeLens"/>

src/uk/org/openeyes/BiometryFunctions.java

@@ -241,10 +241,10 @@ private void createSelectionData() {
         newBasicSelectionData.setLastModifiedUserId(selectedUser);
         newBasicSelectionData.setEventId(importedBiometryEvent.getEventId());
         newBasicSelectionData.setEyeId(new Eye(eventBiometry.getEyeId()));
-        newBasicSelectionData.setIolPowerLeft(BigDecimal.ZERO);
-        newBasicSelectionData.setIolPowerRight(BigDecimal.ZERO);
-        newBasicSelectionData.setPredictedRefractionLeft(BigDecimal.ZERO);
-        newBasicSelectionData.setPredictedRefractionRight(BigDecimal.ZERO);
+        newBasicSelectionData.setIolPowerLeft("0");
+        newBasicSelectionData.setIolPowerRight("0");
+        newBasicSelectionData.setPredictedRefractionLeft("0");
+        newBasicSelectionData.setPredictedRefractionRight("0");
         session.save(newBasicSelectionData);
     }
 
@@ -526,7 +526,7 @@ private OphinbiometryImportedEvents processImportedEvent() {
         if (!currentEvent.list().isEmpty()) {
             importedEvent = (OphinbiometryImportedEvents) currentEvent.list().get(0);
             // if the event is in deleted state we cerate a new record
-            if(importedEvent.getEventId().getDeleted() == 0){
+            if(!importedEvent.getEventId().getDeleted()){
                 dicomLogger.addToRawOutput("StudyID exists in database, merging with existing event...");
 
                 importedEvent.setSopUId(eventStudy.getSopUID());

src/uk/org/openeyes/models/Disorder.java

@@ -8,6 +8,7 @@
 import java.io.Serializable;
 import java.util.Collection;
 import java.util.Date;
+import java.math.BigInteger;
 import javax.persistence.Basic;
 import javax.persistence.Column;
 import javax.persistence.Entity;
@@ -46,7 +47,7 @@ public class Disorder implements Serializable {
     @GeneratedValue(strategy = GenerationType.IDENTITY)
     @Basic(optional = false)
     @Column(name = "id")
-    private Integer id;
+    private BigInteger id;
     @Basic(optional = false)
     @Column(name = "fully_specified_name")
     private String fullySpecifiedName;
@@ -79,11 +80,11 @@ public class Disorder implements Serializable {
     public Disorder() {
     }
 
-    public Disorder(Integer id) {
+    public Disorder(BigInteger id) {
         this.id = id;
     }
 
-    public Disorder(Integer id, String fullySpecifiedName, String term, Date lastModifiedDate, Date createdDate, boolean active) {
+    public Disorder(BigInteger id, String fullySpecifiedName, String term, Date lastModifiedDate, Date createdDate, boolean active) {
         this.id = id;
         this.fullySpecifiedName = fullySpecifiedName;
         this.term = term;
@@ -92,11 +93,11 @@ public Disorder(Integer id, String fullySpecifiedName, String term, Date lastMod
         this.active = active;
     }
 
-    public Integer getId() {
+    public BigInteger getId() {
         return id;
     }
 
-    public void setId(Integer id) {
+    public void setId(BigInteger id) {
         this.id = id;
     }
 

src/uk/org/openeyes/models/EtOphinbiometrySelection.java

@@ -52,16 +52,16 @@ public class EtOphinbiometrySelection implements Serializable {
     // @Max(value=?)  @Min(value=?)//if you know range of your decimal fields consider using these annotations to enforce field validation
     @Basic(optional = false)
     @Column(name = "iol_power_left")
-    private BigDecimal iolPowerLeft;
+    private String iolPowerLeft;
     @Basic(optional = false)
     @Column(name = "predicted_refraction_left")
-    private BigDecimal predictedRefractionLeft;
+    private String predictedRefractionLeft;
     @Basic(optional = false)
     @Column(name = "iol_power_right")
-    private BigDecimal iolPowerRight;
+    private String iolPowerRight;
     @Basic(optional = false)
     @Column(name = "predicted_refraction_right")
-    private BigDecimal predictedRefractionRight;
+    private String predictedRefractionRight;
     @Basic(optional = false)
     @Column(name = "last_modified_date")
     @Temporal(TemporalType.TIMESTAMP)
@@ -99,7 +99,7 @@ public EtOphinbiometrySelection(Integer id) {
         this.id = id;
     }
 
-    public EtOphinbiometrySelection(Integer id, BigDecimal iolPowerLeft, BigDecimal predictedRefractionLeft, BigDecimal iolPowerRight, BigDecimal predictedRefractionRight, Date lastModifiedDate, Date createdDate, boolean deleted, int lensIdLeft, int lensIdRight) {
+    public EtOphinbiometrySelection(Integer id, String iolPowerLeft, String predictedRefractionLeft, String iolPowerRight, String predictedRefractionRight, Date lastModifiedDate, Date createdDate, boolean deleted, int lensIdLeft, int lensIdRight) {
         this.id = id;
         this.iolPowerLeft = iolPowerLeft;
         this.predictedRefractionLeft = predictedRefractionLeft;
@@ -120,35 +120,35 @@ public void setId(Integer id) {
         this.id = id;
     }
 
-    public BigDecimal getIolPowerLeft() {
+    public String getIolPowerLeft() {
         return iolPowerLeft;
     }
 
-    public void setIolPowerLeft(BigDecimal iolPowerLeft) {
+    public void setIolPowerLeft(String iolPowerLeft) {
         this.iolPowerLeft = iolPowerLeft;
     }
 
-    public BigDecimal getPredictedRefractionLeft() {
+    public String getPredictedRefractionLeft() {
         return predictedRefractionLeft;
     }
 
-    public void setPredictedRefractionLeft(BigDecimal predictedRefractionLeft) {
+    public void setPredictedRefractionLeft(String predictedRefractionLeft) {
         this.predictedRefractionLeft = predictedRefractionLeft;
     }
 
-    public BigDecimal getIolPowerRight() {
+    public String getIolPowerRight() {
         return iolPowerRight;
     }
 
-    public void setIolPowerRight(BigDecimal iolPowerRight) {
+    public void setIolPowerRight(String iolPowerRight) {
         this.iolPowerRight = iolPowerRight;
     }
 
-    public BigDecimal getPredictedRefractionRight() {
+    public String getPredictedRefractionRight() {
         return predictedRefractionRight;
     }
 
-    public void setPredictedRefractionRight(BigDecimal predictedRefractionRight) {
+    public void setPredictedRefractionRight(String predictedRefractionRight) {
         this.predictedRefractionRight = predictedRefractionRight;
     }
 

src/uk/org/openeyes/models/Event.java

@@ -66,7 +66,7 @@ public class Event implements Serializable {
     private String info;
     @Basic(optional = false)
     @Column(name = "deleted")
-    private int deleted;
+    private boolean deleted;
     @Column(name = "delete_reason")
     private String deleteReason;
     @Basic(optional = false)
@@ -102,7 +102,7 @@ public Event(Integer id) {
         this.id = id;
     }
 
-    public Event(Integer id, Date lastModifiedDate, Date createdDate, Date eventDate, int deleted, boolean deletePending) {
+    public Event(Integer id, Date lastModifiedDate, Date createdDate, Date eventDate, boolean deleted, boolean deletePending) {
         this.id = id;
         this.lastModifiedDate = lastModifiedDate;
         this.createdDate = createdDate;
@@ -151,11 +151,11 @@ public void setInfo(String info) {
         this.info = info;
     }
 
-    public int getDeleted() {
+    public boolean getDeleted() {
         return deleted;
     }
 
-    public void setDeleted(int deleted) {
+    public void setDeleted(boolean deleted) {
         this.deleted = deleted;
     }