Build executable without Wix #6
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| name: Build executable without Wix | |
| on: | |
| #push: | |
| # branches: | |
| # - main | |
| # - development | |
| pull_request: | |
| branches: [ "main" ] | |
| workflow_dispatch: | |
| env: | |
| OPENMS_VERSION: 3.5.0 | |
| PYTHON_VERSION: 3.10.0 | |
| # Define needed TOPP tools here | |
| TOPP_TOOLS: "OpenNuXL FileConverter PercolatorAdapter" | |
| jobs: | |
| build-openms: | |
| runs-on: windows-2022 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: OpenMS/OpenMS | |
| ref: release/${{ env.OPENMS_VERSION }} | |
| path: 'OpenMS' | |
| - name: Install Qt (Windows) | |
| uses: jurplel/install-qt-action@v4 | |
| with: | |
| version: '6.8.3' ## Note this version is build with win64_msvc2022_64 and should always match what we use | |
| arch: 'win64_msvc2022_64' | |
| cache: 'false' | |
| archives: 'qtsvg qtimageformats qtbase' | |
| # https://github.com/marketplace/actions/visual-studio-shell | |
| - name: Set up Visual Studio shell | |
| uses: egor-tensin/vs-shell@v2 | |
| with: | |
| arch: x64 | |
| - name: Setup build tools | |
| shell: bash | |
| run: | | |
| choco install ccache ninja -y --no-progress | |
| choco install cmake --version=3.31.1 -y --no-progress --force | |
| ## GH CLI "SHOULD BE" installed. Sometimes I had to manually install nonetheless. Super weird. | |
| # https://github.com/actions/runner-images/blob/main/images/win/scripts/Installers/Install-GitHub-CLI.ps1 | |
| echo "C:/Program Files (x86)/GitHub CLI" >> $GITHUB_PATH | |
| - name: Extract branch/PR infos | |
| shell: bash | |
| run: | | |
| cd OpenMS | |
| RUN_NAME_LOCAL=$(echo ${GITHUB_REF#refs/heads/} | tr / -) | |
| echo "RUN_NAME=${RUN_NAME_LOCAL}" >> $GITHUB_ENV | |
| echo "BASE_REF=$(gh pr view --json baseRefName -q .baseRefName || echo ${RUN_NAME_LOCAL})" >> $GITHUB_ENV | |
| id: extract_branch | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Cache contrib | |
| id: cache-contrib-win | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ github.workspace }}/OpenMS/contrib | |
| key: ${{ runner.os }}-contrib3 | |
| - name: Load contrib build | |
| if: steps.cache-contrib-win.outputs.cache-hit != 'true' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| cd OpenMS/contrib | |
| # Download the file using the URL fetched from GitHub | |
| gh release download -R OpenMS/contrib --pattern 'contrib_build-Windows.tar.gz' | |
| # Extract the archive | |
| 7z x -so contrib_build-Windows.tar.gz | 7z x -si -ttar | |
| rm contrib_build-Windows.tar.gz | |
| ls | |
| - name: Add contrib to PATH | |
| shell: bash | |
| run: | | |
| # Add contrib library path for runtime DLL resolution | |
| echo "${{ github.workspace }}/OpenMS/contrib/lib" >> $GITHUB_PATH | |
| - name: Setup ccache cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: .ccache | |
| key: ${{ runner.os }}-ccache-${{ env.RUN_NAME }}-${{ github.run_number }} | |
| # Restoring: From current branch, otherwise from base branch, otherwise from any branch. | |
| restore-keys: | | |
| ${{ runner.os }}-ccache-${{ env.RUN_NAME }} | |
| ${{ runner.os }}-ccache-${{ env.BASE_REF }} | |
| ${{ runner.os }}-ccache- | |
| - name: Add THIRDPARTY | |
| shell: bash | |
| run: | | |
| # initialize THIRDPARTY | |
| cd OpenMS | |
| git submodule update --init THIRDPARTY | |
| cd .. | |
| # add third-party binaries to PATH | |
| # use flat THIRDPARTY structure | |
| mkdir -p _thirdparty | |
| cp -R OpenMS/THIRDPARTY/Windows/x86_64/* _thirdparty/ | |
| cp -R OpenMS/THIRDPARTY/All/* _thirdparty/ | |
| # add third-party binaries to PATH | |
| for thirdpartytool in ${{ github.workspace }}/_thirdparty/* | |
| do | |
| echo $thirdpartytool >> $GITHUB_PATH | |
| done | |
| - name: Build Windows | |
| shell: bash | |
| run: | | |
| mkdir $GITHUB_WORKSPACE/OpenMS/bld/ | |
| bash OpenMS/tools/ci/capture-env.sh -v $GITHUB_WORKSPACE/OpenMS/bld/CMakeCache.txt | |
| ctest --output-on-failure -V -S $GITHUB_WORKSPACE/OpenMS/tools/ci/cibuild.cmake | |
| env: | |
| OPENMS_CONTRIB_LIBS: "${{ github.workspace }}/OpenMS/contrib" | |
| CI_PROVIDER: "GitHub-Actions" | |
| CMAKE_GENERATOR: "Ninja" | |
| SOURCE_DIRECTORY: "${{ github.workspace }}/OpenMS" | |
| BUILD_NAME: "${{ env.RUN_NAME }}-Win64-class-topp-${{ github.run_number }}" | |
| ENABLE_STYLE_TESTING: "OFF" | |
| ENABLE_TOPP_TESTING: "ON" | |
| ENABLE_CLASS_TESTING: "ON" | |
| WITH_GUI: "OFF" | |
| WITH_PARQUET: "OFF" | |
| ADDRESS_SANITIZER: "Off" | |
| BUILD_TYPE: "Release" | |
| OPENMP: "Off" | |
| USE_STATIC_BOOST: "On" | |
| # BUILD_FLAGS: "-p:CL_MPCount=2" # For VS Generator and MSBuild | |
| BUILD_FLAGS: "-j2" # Ninja will otherwise use all cores (doesn't go well in GHA) | |
| CMAKE_CCACHE_EXE: "ccache" | |
| CCACHE_BASEDIR: ${{ github.workspace }} | |
| CCACHE_DIR: ${{ github.workspace }}/.ccache | |
| CCACHE_COMPRESS: true | |
| CCACHE_COMPRESSLEVEL: 12 | |
| CCACHE_MAXSIZE: 400M | |
| - name: Test Windows | |
| shell: bash | |
| run: ctest --output-on-failure -V -S $GITHUB_WORKSPACE/OpenMS/tools/ci/citest.cmake | |
| env: | |
| SOURCE_DIRECTORY: "${{ github.workspace }}/OpenMS" | |
| CI_PROVIDER: "GitHub-Actions" | |
| BUILD_NAME: "${{ env.RUN_NAME }}-Win64-class-topp-${{ github.run_number }}" | |
| - name: Package | |
| shell: bash | |
| run: | | |
| ctest --output-on-failure -V -S $GITHUB_WORKSPACE/OpenMS/tools/ci/cipackage.cmake | |
| env: | |
| SOURCE_DIRECTORY: "${{ github.workspace }}/OpenMS" | |
| PACKAGE_TYPE: zip | |
| SEARCH_ENGINES_DIRECTORY: "${{ github.workspace }}/_thirdparty" | |
| CI_PROVIDER: "GitHub-Actions" | |
| CPACK_PACKAGE_FILE_NAME: "openms-package" | |
| - name: Upload package as artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: openms-package | |
| path: | | |
| ${{ github.workspace }}/OpenMS/bld/*.zip | |
| #${{ github.workspace }}/OpenMS/bld/bin/* | |
| #${{ github.workspace }}/_thirdparty/* | |
| #${{ github.workspace }}/OpenMS/bld/bin/OpenNuXL.exe | |
| #${{ github.workspace }}/OpenMS/bld/bin/FileConverter.exe | |
| #${{ github.workspace }}/OpenMS/bld/bin/PercolatorAdapter.exe | |
| #${{ github.workspace }}/OpenMS/bld/bin/*.dll | |
| #${{ github.workspace }}/_thirdparty/*.exe | |
| #${{ github.workspace }}/_thirdparty/ThermoRawFileParser/** | |
| #${{ github.workspace }}/_thirdparty/Percolator/** | |
| build-executable: | |
| runs-on: windows-2022 | |
| needs: build-openms | |
| env: | |
| PYTHON_VERSION: 3.10.0 | |
| APP_NAME: OpenMS-NuXLApp | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Download package as artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: openms-package | |
| path: openms-package | |
| - name: Extract bin and share from package | |
| run: | | |
| cd openms-package | |
| unzip "*.zip" -d . | |
| cp -r openms-package/bin ../openms-bin | |
| cp -r openms-package/share ../share | |
| - name: Set up Python (regular distribution) | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ env.PYTHON_VERSION }} # Use the same version as the embeddable version | |
| - name: Setup python embeddable version | |
| run: | | |
| # Create a directory for the embeddable Python version | |
| mkdir python-${{ env.PYTHON_VERSION }} | |
| # Download and unzip the embeddable Python version | |
| curl -O https://www.python.org/ftp/python/${{ env.PYTHON_VERSION }}/python-${{ env.PYTHON_VERSION }}-embed-amd64.zip | |
| unzip python-${{ env.PYTHON_VERSION }}-embed-amd64.zip -d python-${{ env.PYTHON_VERSION }} | |
| rm python-${{ env.PYTHON_VERSION }}-embed-amd64.zip | |
| # Define paths for the regular Python distribution and the embeddable distribution | |
| $PYTHON_DIR="${{ runner.tool_cache }}/Python/${{ env.PYTHON_VERSION }}/x64" # Path from actions/setup-python | |
| $EMBED_DIR="python-${{ env.PYTHON_VERSION }}" | |
| mkdir -p $EMBED_DIR/Lib/site-packages/tkinter | |
| mkdir -p $EMBED_DIR/tcl | |
| # Copy necessary Tkinter files from the regular Python distribution | |
| cp -r $PYTHON_DIR/Lib/tkinter/* $EMBED_DIR/Lib/site-packages/tkinter/ | |
| cp -r $PYTHON_DIR/tcl/* $EMBED_DIR/tcl/ | |
| cp $PYTHON_DIR/DLLs/_tkinter.pyd $EMBED_DIR/ | |
| cp $PYTHON_DIR/DLLs/tcl86t.dll $EMBED_DIR/ | |
| cp $PYTHON_DIR/DLLs/tk86t.dll $EMBED_DIR/ | |
| - name: Install pip | |
| run: | | |
| curl -O https://bootstrap.pypa.io/get-pip.py | |
| ./python-${{ env.PYTHON_VERSION }}/python get-pip.py --no-warn-script-location | |
| rm get-pip.py | |
| - name: Uncomment 'import site' in python310._pth file | |
| run: | | |
| sed -i 's/#import site/import site/' python-${{ env.PYTHON_VERSION }}/python310._pth | |
| - name: Install Required Packages | |
| run: .\python-${{ env.PYTHON_VERSION }}\python -m pip install --force-reinstall -r requirements.txt --no-warn-script-location | |
| - name: Install pyopenms | |
| run: .\python-${{ env.PYTHON_VERSION }}\python -m pip install pyopenms==3.1.0 --no-warn-script-location | |
| #- name: Install numpy | |
| # run: .\python-${{ env.PYTHON_VERSION }}\python -m pip install numpy==1.22.4 --no-warn-script-location | |
| - name: Set to offline deployment | |
| run: | | |
| $content = Get-Content -Raw settings.json | ConvertFrom-Json | |
| $content.online_deployment = $false | |
| $content | ConvertTo-Json -Depth 100 | Set-Content settings.json | |
| - name: Create .bat file | |
| run: | | |
| echo " start /min .\python-${{ env.PYTHON_VERSION }}\python -m streamlit run app.py local" > ${{ env.APP_NAME }}.bat | |
| - name: Create All-in-one executable folder | |
| run: | | |
| if (Test-Path -Path "streamlit_exe") { | |
| Remove-Item -Recurse -Force "streamlit_exe" | |
| } | |
| mkdir streamlit_exe | |
| mv python-${{ env.PYTHON_VERSION }} streamlit_exe | |
| cp -r src streamlit_exe | |
| cp -r content streamlit_exe | |
| cp -r assets streamlit_exe | |
| cp -r example-data streamlit_exe | |
| cp -r .streamlit streamlit_exe | |
| cp app.py streamlit_exe | |
| cp settings.json streamlit_exe | |
| cp ${{ env.APP_NAME }}.bat streamlit_exe | |
| $files = $env:TOPP_TOOLS -split ' ' | |
| foreach ($file in $files) { | |
| Copy-Item "openms-bin/${file}.exe" -Destination "streamlit_exe/${file}.exe" | |
| } | |
| - name: Generate Readme.txt | |
| shell: bash | |
| run: | | |
| cat <<EOF > streamlit_exe/Readme.txt | |
| Welcome to ${{ env.APP_NAME }} app! | |
| To launch the application: | |
| 1. Navigate to the installation directory. | |
| 2. Double-click on the file: ${{ env.APP_NAME }}.bat or ${{ env.APP_NAME }} shortcut. | |
| Additional Information: | |
| - If multiple Streamlit apps are running, you can change the port in the .streamlit/config.toml file. | |
| Example: | |
| [server] | |
| port = 8502 | |
| Reach out to us: | |
| - Join our Discord server for support and community discussions: https://discord.com/invite/4TAGhqJ7s5 | |
| - Contribute or stay updated with the latest OpenMS web app developments on GitHub: https://github.com/OpenMS/streamlit-template | |
| - Checkout the ${{ env.APP_NAME }} on Github: https://github.com/Arslan-Siraj/nuxl-app | |
| - Visit our website for more information: https://openms.de/ | |
| Thanks for using ${{ env.APP_NAME }}! | |
| EOF | |
| - name: Archive build artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: OpenMS_NuXLApp_without_Wix | |
| path: | | |
| streamlit_exe |