Fixes weird recording behaviour with custom models in cellpose and omnipose

Author: NicoKiaru

Diff for: src/main/java/ch/epfl/biop/wrappers/cellpose/ij2commands/Cellpose.java

@@ -154,15 +154,17 @@ public void run() {
         settings.setEnvPath(env_path.toString());
         settings.setEnvType(env_type);
         settings.setDatasetDir(cellposeTempDir.toString());
-
-        if ( model==null || model.trim().isEmpty()){
-            System.out.println("Using custom model");
-            model = model_path.toString();
+        String model_used = model;
+        if (model==null || model.trim().isEmpty()){
+            ls.info("Using cellpose custom model: "+model_path);
+            model_used = model_path.toString();
         }
-        settings.setModel(model);
+        settings.setModel(model_used);
         settings.setDiameter(diameter);
         settings.setChannel1(ch1);
-        if (ch2 > -1 ) settings.setChannel2(ch2);
+        if (ch2 > -1) {
+            settings.setChannel2(ch2);
+        }
         settings.setAdditionalFlags(additional_flags);
 
         // settings are done , so we can now process the imp with cellpose

Diff for: src/main/java/ch/epfl/biop/wrappers/omnipose/ij2commands/Omnipose.java

@@ -157,11 +157,12 @@ public void run() {
         settings.setEnvType(env_type);
         settings.setDatasetDir(omniposeTempDir.toString());
 
-        if ( model==null || model.trim().isEmpty()){
-            System.out.println("Using custom model");
-            model = model_path.toString();
+        String model_used = model;
+        if (model==null || model.trim().isEmpty()){
+            ls.info("Using omnipose custom model: "+model_path);
+            model_used = model_path.toString();
         }
-        settings.setModel(model);
+        settings.setModel(model_used);
         settings.setDiameter(diameter);
         settings.setChannel1(ch1);
         if (ch2 > -1 ) settings.setChannel2(ch2);