Adds icons

Adds no slice selected message on rotation
Updates bdv-biop-tools version

Author: NicoKiaru

graphics/ABBA Icons.ai

@@ -109,7 +109,7 @@
 		<!-- bdv playground related dependencies -->
 		<bigdataviewer-playground.version>0.11.2</bigdataviewer-playground.version>
 		<bigdataviewer-image-loaders.version>0.11.2</bigdataviewer-image-loaders.version>
-		<bigdataviewer-biop-tools.version>0.13.4-SNAPSHOT</bigdataviewer-biop-tools.version>
+		<bigdataviewer-biop-tools.version>0.13.4</bigdataviewer-biop-tools.version>
 		<bigdataviewer-selector.version>0.2.8</bigdataviewer-selector.version>
 		<ijl-utilities-wrappers.version>0.11.5</ijl-utilities-wrappers.version>
 

pom.xml

@@ -365,8 +365,12 @@ public String getRedoMessage() {
 
     public void rotateSlices(int axis, double angle_rad) {
         List<SliceSources> sortedSelected = getSlices().stream().filter(SliceSources::isSelected).collect(Collectors.toList());
-        for (SliceSources slice : sortedSelected) {
-            slice.rotateSourceOrigin(axis, angle_rad);
+        if (sortedSelected.isEmpty()) {
+            this.warningMessageForUser.accept("No Slice(s) Selected", "Can't apply transformation to empty selection.");
+        } else {
+            for (SliceSources slice : sortedSelected) {
+                slice.rotateSourceOrigin(axis, angle_rad);
+            }
         }
     }
 

src/main/java/ch/epfl/biop/atlas/aligner/MultiSlicePositioner.java

@@ -28,7 +28,9 @@
 
 
 @SuppressWarnings("CanBeFinal")
-@Plugin(type = Command.class, menuPath = "Plugins>BIOP>Atlas>Multi Image To Atlas>Export>ABBA - Export registered slices as QuickNII dataset")
+@Plugin(type = Command.class,
+        menuPath = "Plugins>BIOP>Atlas>Multi Image To Atlas>Export>ABBA - Export registered slices as QuickNII dataset",
+        iconPath = "/graphics/ABBAToQNII.png")
 public class ExportSlicesToQuickNIIDatasetCommand implements Command {
 
     @Parameter(style = "message", visibility = ItemVisibility.MESSAGE)

src/main/java/ch/epfl/biop/atlas/aligner/command/ExportSlicesToQuickNIIDatasetCommand.java

@@ -41,7 +41,8 @@
 
 @Plugin(type = Command.class,
         menuPath = "Plugins>BIOP>Atlas>Multi Image To Atlas>Import>ABBA - Import QuickNII Project",
-        description = "Import images of a QuickNII Project as slices into ABBA")
+        description = "Import images of a QuickNII Project as slices into ABBA",
+        iconPath = "/graphics/QNIIToABBA.png")
 public class ImportSlicesFromQuickNIICommand implements Command {
 
     @Parameter(style = "message", visibility = ItemVisibility.MESSAGE)

src/main/java/ch/epfl/biop/atlas/aligner/command/ImportSlicesFromQuickNIICommand.java

@@ -18,7 +18,8 @@
 
 @Plugin(type = Command.class,
         menuPath = "Plugins>BIOP>Atlas>Multi Image To Atlas>Edit>ABBA - Interactive Transform",
-        description = "To use at the beginning of the registration process only! Rotates, scales, translate the original unregistered selected slices")
+        description = "To use at the beginning of the registration process only! Rotates, scales, translate the original unregistered selected slices",
+        iconPath = "/graphics/InteractiveTransform.png")
 public class SliceAffineTransformCommand extends InteractiveCommand implements MultiSlicePositioner.MultiSlicePositionerListener {
 
     @Parameter