Fix #234

Update dependencies (bdv-image-loaders)

Author: NicoKiaru

pom.xml

@@ -108,7 +108,7 @@
 
 		<!-- bdv playground related dependencies -->
 		<bigdataviewer-playground.version>0.11.2</bigdataviewer-playground.version>
-		<bigdataviewer-image-loaders.version>0.10.5-SNAPSHOT</bigdataviewer-image-loaders.version>
+		<bigdataviewer-image-loaders.version>0.10.5</bigdataviewer-image-loaders.version>
 		<bigdataviewer-biop-tools.version>0.12.0</bigdataviewer-biop-tools.version>
 		<bigdataviewer-selector.version>0.2.8</bigdataviewer-selector.version>
 

src/main/java/ch/epfl/biop/atlas/aligner/MultiSlicePositioner.java

@@ -1112,7 +1112,7 @@ public boolean loadState(File stateFileAbba) {
             return legacyLoadState(stateFileAbba);
         }
 
-        boolean emptyState = this.slices.size()==0;
+        boolean emptyState = this.slices.isEmpty();
         // TODO : add a clock as an overlay
         getSlices().forEach(SliceSources::waitForEndOfTasks);
         // We prepare the loading of the state, so that's a task:

src/main/java/ch/epfl/biop/atlas/aligner/gui/bdv/BdvMultislicePositionerView.java

@@ -139,12 +139,7 @@
 import java.nio.file.Files;
 import java.nio.file.Paths;
 import java.text.DecimalFormat;
-import java.util.ArrayList;
-import java.util.HashSet;
-import java.util.List;
-import java.util.Map;
-import java.util.Optional;
-import java.util.Set;
+import java.util.*;
 import java.util.concurrent.ConcurrentHashMap;
 import java.util.concurrent.atomic.AtomicBoolean;
 import java.util.function.BiConsumer;
@@ -1058,9 +1053,11 @@ public void saveState(File stateFileIn) {
 
             // Ok, let's save the view File
 
-            //serializeView(viewFile);
-            List<SliceGuiState.State> states = new ArrayList<>();
-            guiState.forEachSlice(sliceState -> states.add(new SliceGuiState.State(sliceState)));
+            List<SliceGuiState.State> states = new ArrayList<>(Collections.nCopies(msp.getSlices().size(), null));
+
+            guiState.forEachSlice(sliceState ->
+                    states.set(sliceState.slice.getIndex(), new SliceGuiState.State(sliceState))
+            );
             ViewState vs = new ViewState();
             vs.slicesStates = states;
             vs.showInfo = showSliceInfo;
@@ -2455,7 +2452,7 @@ void deleted(SliceSources slice) {
 
         //synchronized
         int nSlices() {
-            return sliceGuiState.values().size();
+            return sliceGuiState.size();
         }
 
         //synchronized