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## Citing
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If you use ABBA in your work, please cite the paper below, currently in pre-print:
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If you use ABBA in your work, please cite the paper below:
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> [!IMPORTANT]
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> Chiaruttini, N.; Castoldi, C.; Requie, L. et al. **ABBA+BraiAn, an integrated suite for whole-brain mapping, reveals brain-wide differences in immediate-early genes induction upon learning**. _Cell Reports_ (2025).\
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> [https://doi.org/10.1016/j.celrep.2025.115876](https://doi.org/10.1016/j.celrep.2025.115876)
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Please do not forget to cite other tools you may use, such as DeepSlice, Brainglobe, QuPath...
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## Building
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You can build the QuPath ABBA extension from source with

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