nilearn/.github/workflows/test_atlases.yml at 2ee22fd926ac921e6f8839729cbb20f8ef132b91 · BastienCagna/nilearn · GitHub

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---
# Test label maskers on atlases (from nilearn, templateFlow...)
#
###
name: test atlases

on:
    schedule:
        # Uses the cron schedule for github actions
        # https://docs.github.com/en/actions/reference/workflows-and-actions/events-that-trigger-workflows#schedule
        #     ┌───────────── minute (0 - 59)
        #     │ ┌───────────── hour (0 - 23)
        #     │ │ ┌───────────── day of the month (1 - 31)
        #     │ │ │ ┌───────────── month (1 - 12 or JAN-DEC)
        #     │ │ │ │ ┌───────────── day of the week (0 - 6 or SUN-SAT)
        #     │ │ │ │ │
        #     │ │ │ │ │
        #     │ │ │ │ │
        #     * * * * *
        # Runs at 00:00, on day 1 of every 3rd month
    -   cron: 0 0 1 */3 *

    # This enables manual triggering from GitHub UI
    # https://docs.github.com/en/actions/reference/workflows-and-actions/events-that-trigger-workflows#workflow_dispatch
    workflow_dispatch:

concurrency:
    group: ${{ github.workflow }}-${{ github.ref }}
    cancel-in-progress: true

# Force to use color
env:
    FORCE_COLOR: true

jobs:
    test_atlases:
        if: github.repository == 'nilearn/nilearn'

        runs-on: ubuntu-latest

        steps:
        -   name: Checkout nilearn
            uses: actions/checkout@v6

        -   name: Setup python
            uses: actions/setup-python@v6
            with:
                python-version: 3.14

        -   name: Install dependencies for building Nilearn
            run: python -m pip install --upgrade pip setuptools rich templateflow

        -   name: Install nilearn
            run: pip install '.[plotting]'

        -   name: Test atlases
            id: test_atlas
            continue-on-error: true
            run: python maint_tools/check_atlas.py

        -   name: Upload masker reports
            if: success() || failure()
            uses: actions/upload-artifact@v7
            with:
                name: label_masker_reports
                path: maint_tools/tmp

        -   name: Create issue
            if: ${{ steps.test_atlas.outcome != 'success' }}
            uses: JasonEtco/create-an-issue@v2.9.2
            env:
                GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
                run_id: ${{ github.run_id }}
                repository: ${{ github.repository }}
                workflow_name: TEST ATLAS
            with:
                filename: .github/workflow_failure.md
                update_existing: true
                search_existing: open

        -   name: Return failure
            if: ${{ steps.test_atlas.outcome != 'success' }}
            run: exit 1