display coverage in CI

Author: orbeckst

.github/workflows/ci.yaml

@@ -110,8 +110,12 @@ jobs:
         python -m pip install --no-deps .
 
     - name: Run tests
+      run: | 
+        pytest -v --disable-pytest-warnings --durations=20 --low-performance --cov=gromacs --cov-report=xml --cov-report=term-missing --color=yes ./tests
+
+    - name: Coverage report
       run: |
-        pytest -v --disable-pytest-warnings --durations=20 --low-performance --cov=gromacs --cov-report=xml --color=yes ./tests
+        coverage report --show-missing
 
     - name: Codecov
       uses: codecov/codecov-action@v4

ci/conda-envs/test_env.yaml

@@ -13,4 +13,5 @@ dependencies:
 - codecov
 - pytest 
 - pytest-cov 
-- pytest-pep8 
+- pytest-pep8
+- coverage