minimal coverage configuration

Author: orbeckst

.github/workflows/ci.yaml

@@ -114,9 +114,9 @@ jobs:
         --disable-pytest-warnings
         --durations=20
         --low-performance
-        --cov=gromacs
+        --cov="./gromacs
         --cov-report=xml
-        --cov-report=term-missing
+        --cov-report=term
         --color=yes
         ./tests
 

ci/conda-envs/test_env.yaml

@@ -10,9 +10,9 @@ dependencies:
 - pocl
 - setuptools
 # dev tools
-- codecov
 - pytest 
 - pytest-cov 
 #- pytest-pep8
-- pytest-xdist
+#- pytest-xdist
 - coverage
+- codecov

pyproject.toml

@@ -91,7 +91,6 @@ extend-exclude = "tests/(test_core|fileformats/test_convert)\\.py"
 
 [tool.coverage.run]
 branch = true
-source = ["gromacs"]
 omit = [
     "doc/sphinx/source/conf.py"
 ]