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| name: Build and publish | |
| on: | |
| push: | |
| branches: [devel] # Run this workflow only when pushing to the 'devel' branch | |
| jobs: | |
| build-deploy: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 # Ensure full git history is available (needed for Quarto publishing) | |
| ref: devel # Explicitly check out the 'devel' branch | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| # Fixes "dubious ownership" error when running inside container | |
| - name: Mark repo as safe for git | |
| run: git config --global --add safe.directory $GITHUB_WORKSPACE | |
| # Makes sure 'gh-pages' branch exists locally so Quarto can publish to it | |
| - name: Fetch gh-pages branch | |
| run: git fetch origin gh-pages:gh-pages | |
| # We could specify Quarto version, but if we want to always use the latest | |
| # one, we need the following libraries to get the information on what is | |
| # the latest Quarto version. | |
| - name: Install GitHub CLI and jq | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y gh jq | |
| # Install Quarto | |
| - name: Set up Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| # Ensure that the caching directory is available | |
| - name: Ensure R library directory exists | |
| run: mkdir -p $R_LIBS_USER | |
| # Cache previously installed R packages to speed up future builds | |
| - name: Cache R packages | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-r-${{ hashFiles('**/DESCRIPTION') }} | |
| restore-keys: | | |
| ${{ runner.os }}-r- | |
| # Install all R dependencies defined in DESCRIPTION file | |
| - name: Install dependencies | |
| run: | | |
| Rscript -e "install.packages('devtools')" | |
| Rscript -e "devtools::install_deps(dependencies = TRUE)" | |
| # Build the Quarto project into HTML | |
| - name: Render site | |
| run: quarto render | |
| # Push the rendered site to the gh-pages branch for GitHub Pages hosting | |
| - name: Publish to GitHub Pages | |
| uses: quarto-dev/quarto-actions/publish@v2 | |
| with: | |
| target: gh-pages | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} |