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.nojekyll

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index.html

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- <span class="deadline"><strong>February 13:</strong> Call for abstracts closes (final extended deadline)</span>
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--></li>
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<li><del><strong>February 13</strong>: Call for abstracts closes (final extended deadline)</del></li>
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<li><strong>February</strong>: Registration opens</li>
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<li><strong>February 20</strong>: Registration opens</li>
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<li><strong>May 3</strong>: Registration closes</li>
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<li><strong>June 1-2</strong>: Workshop and hackathon</li>
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<li><strong>June 3-5</strong>: The EuroBioC2026 conference!</li>
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</ul>

pages/about-turku.html

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pages/pre-conference.html

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<li><a href="#hackathon" id="toc-hackathon" class="nav-link" data-scroll-target="#hackathon">2. <strong>Hackathon</strong></a></li>
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</ul></li>
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<li><a href="#venue-and-requirements" id="toc-venue-and-requirements" class="nav-link" data-scroll-target="#venue-and-requirements">Venue and requirements</a></li>
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<li><a href="#registration" id="toc-registration" class="nav-link" data-scroll-target="#registration">Registration</a></li>
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<li><a href="#what-is-a-bioconductor-carpentry-workshop" id="toc-what-is-a-bioconductor-carpentry-workshop" class="nav-link" data-scroll-target="#what-is-a-bioconductor-carpentry-workshop">What is a Bioconductor Carpentry Workshop</a></li>
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<li><a href="#questions" id="toc-questions" class="nav-link" data-scroll-target="#questions">Questions?</a></li>
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</ul></li>
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</ul>
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</nav>
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<section id="pre-conference-events" class="level1">
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<h1>Pre-conference events</h1>
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<div class="callout callout-style-default callout-warning no-icon callout-titled">
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<div class="callout callout-style-default callout-tip no-icon callout-titled">
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<div class="callout-header d-flex align-content-center">
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<div class="callout-icon-container">
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<i class="callout-icon no-icon"></i>
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</div>
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<div class="callout-title-container flex-fill">
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<span class="screen-reader-only">Warning</span><strong>Registration has not yet opened</strong>
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<span class="screen-reader-only">Tip</span><strong>Registration is open</strong>
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</div>
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</div>
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<div class="callout-body-container callout-body">
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<p>Information will be added here soon.</p>
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<p>Each event spans two days. Participants should register for <strong>either</strong> the workshop or the hackathon.</p>
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<p>Register for<br>
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- <a href="https://portal.lyyti.fi/reg16/?p=choose&amp;uid=1f10ccde-d871-60b2-9c74-47c5a587250c">Workshop</a><br>
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- <a href="https://docs.google.com/forms/d/e/1FAIpQLSdQPwHgF7fJwfwkXxKPZeB5W_MjTMQpjLbRZj1ix-bA4vLYOg/viewform?usp=header">Hackathon</a></p>
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<p>Registration closes on <strong>Sunday, May 3</strong>, or earlier if capacity is reached.</p>
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</div>
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</div>
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<section id="fees" class="level2">
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<h2 class="anchored" data-anchor-id="fees">Fees</h2>
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<table class="caption-top table">
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<colgroup>
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<col style="width: 90%">
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<col style="width: 9%">
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<th style="text-align: left;">Type</th>
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</thead>
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<tbody>
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<tr class="odd">
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<td style="text-align: left;">Orchestrating Microbiome Analysis with Bioconductor workshop (includes lunches and coffee)</td>
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<td style="text-align: left;">Workshop (includes lunches)</td>
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<td style="text-align: center;"><strong>€100</strong></td>
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</tr>
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<tr class="even">
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</tr>
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</tbody>
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</table>
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<div class="callout callout-style-default callout-note callout-titled">
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<div class="callout callout-style-default callout-note no-icon callout-titled">
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<div class="callout-header d-flex align-content-center">
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<div class="callout-icon-container">
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<i class="callout-icon"></i>
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<i class="callout-icon no-icon"></i>
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</div>
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<div class="callout-title-container flex-fill">
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Note
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<span class="screen-reader-only">Note</span><strong>Workshop fee</strong>
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</div>
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</div>
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<div class="callout-body-container callout-body">
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<p>Each event spans two days. Participants should register for <strong>either</strong> the workshop or the hackathon.</p>
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<p>If you are unable to pay the fee, you may request to be added to a waiting list in case funding becomes available. Please note that places will be filled on a first‑come, first‑served basis by paying participants. If all places fill before funding becomes available, we may not be able to offer you a spot.</p>
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</div>
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</section>
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<section id="event-descriptions" class="level2">
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<h2 class="anchored" data-anchor-id="event-descriptions">Event descriptions</h2>
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<p>Before the conference, on <strong>Monday and Tuesday, 1–2 June</strong>, the <a href="https://training.bioconductor.org">Bioconductor Training Committee</a>, in collaboration with the <a href="https://www.utu.fi">University of Turku</a>, <a href="https://biocityturku.fi/research-programs/complifesci/">CompLifeSci</a>, and <a href="https://www.bioinf.fi/">the Finnish Society for Bioinformatics</a>, will organize the following two-day pre-conference events:</p>
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<ol type="1">
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<li><strong>Carpentries workshop: Orchestrating Microbiome Analysis with Bioconductor</strong><br>
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<li><strong>Workshop: Orchestrating Microbiome Analysis with Bioconductor</strong><br>
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</li>
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<li><strong>Hackathon</strong></li>
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</ol>
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<p>The course combines lectures with practical exercises to give participants the skills and confidence to run common microbiome analysis workflows independently using freely available resources.</p>
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<p><strong>Prerequisites:</strong> Familiarity with R and Bioconductor</p>
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<p><strong>Instructors:</strong> Leo Lahti, Himel Mallick and Tuomas Borman</p>
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<section id="what-is-a-bioconductor-carpentry-workshop" class="level4">
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<h4 class="anchored" data-anchor-id="what-is-a-bioconductor-carpentry-workshop">What is a Bioconductor Carpentry Workshop</h4>
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<p><a href="https://carpentries.org">The Carpentries</a> is a global community focused on teaching foundational coding and data science skills to researchers. The core of this community are <a href="https://carpentries.org/community/instructors">Carpentries Instructors</a>, who work together to grow their instructional and technical skills. Bioconductor is a member of The Carpentries, supporting community members to earn Carpentries instructor certification, develop Bioconductor-specific training materials, and teach Carpentry workshops on those materials.</p>
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<p>A Bioconductor Carpentry Workshop is a course on how to use Bioconductor packages and workflows, led by Carpentry-certified instructors on materials developed by the Bioconductor community.</p>
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</section>
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<section id="hackathon" class="level3">
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</ul>
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<p>Participants are welcome to bring or propose their own topics as well. Support for general bug hunting or feature additions in existing packages that are willing to accept pull requests will also be supported.</p>
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<p>Bioconductor is a mature, diverse, and well-maintained project with many different ways to contribute. Participants from all career stages and technical backgrounds are welcome, with the only requirements being a willingness to learn and work well in a collaborative environment.</p>
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<!--- If you are interested in attending, please [fill out this google form](https://docs.google.com/forms/d/e/1FAIpQLSdQPwHgF7fJwfwkXxKPZeB5W_MjTMQpjLbRZj1ix-bA4vLYOg/viewform?usp=header). --->
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<p>The details on registration will be added here soon. We will be in contact about a month before the conference to confirm participation, plan out teams for projects, and ensure any questions or concerns are addressed.</p>
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<p>We will be in contact about a month before the conference to confirm participation, plan out teams for projects, and ensure any questions or concerns are addressed.</p>
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<p>Hackathon goals can vary widely depending on project complexity, but in general working and tested R packages are the goal where applicable. Tangible contributions to repositories that can be clearly professionally communicated will be the goal otherwise.</p>
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<p>If you have any questions, please contact Nicholas(dot)Cooley(at)ul(dot)ie.</p>
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<li>Wireless internet (Eduroam WiFi available)</li>
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</ul>
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</section>
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<section id="registration" class="level2">
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<h2 class="anchored" data-anchor-id="registration">Registration</h2>
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<p>Details about registration and fees will be provided shortly.</p>
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</section>
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<section id="what-is-a-bioconductor-carpentry-workshop" class="level2">
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<h2 class="anchored" data-anchor-id="what-is-a-bioconductor-carpentry-workshop">What is a Bioconductor Carpentry Workshop</h2>
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<p><a href="https://carpentries.org">The Carpentries</a> is a global community focused on teaching foundational coding and data science skills to researchers. The core of this community are <a href="https://carpentries.org/community/instructors">Carpentries Instructors</a>, who work together to grow their instructional and technical skills. Bioconductor is a member of The Carpentries, supporting community members to earn Carpentries instructor certification, develop Bioconductor-specific training materials, and teach Carpentry workshops on those materials.</p>
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<p>A Bioconductor Carpentry Workshop is a course on how to use Bioconductor packages and workflows, led by Carpentry-certified instructors on materials developed by the Bioconductor community.</p>
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<section id="questions" class="level2">
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<h2 class="anchored" data-anchor-id="questions">Questions?</h2>
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<p>If you have any questions about the pre-conference workshop or hackathon, do not hesitate to contact the <a href="organizers.html">organizers</a> at <a href="mailto:eurobioc@bioconductor.org">eurobioc@bioconductor.org</a>.</p>
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pages/registration.html

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<h1>Registration</h1>
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<p>Information will be added here soon.</p>
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<p>Secure your place by registering <a href="https://www.lyyti.fi/reg/EuroBioC2026">here</a>.</p>
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<p>Registration closes on <strong>Sunday, May 3</strong>, or earlier if all places are filled.</p>
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<h2 class="anchored" data-anchor-id="additional-information">Additional Information</h2>
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<!--
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**Registration for EuroBioC2025 is open at
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[https://eventum.upf.edu/go/eurobioc2025](https://eventum.upf.edu/go/eurobioc2025){target="_blank"}
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until Thursday August 28th**, or earlier if places are sold out; see the
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number of available spots at the online registration system.
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**Important:** If you need an invoice to order the payment by bank transfer or
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to get the registration fee reimbursed by your employer, please fill out the
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invoicing information details in the corresponding text box of the registration
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form. Note that the online registration system **does not** automatically
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generate invoices and it may take us a few days or weeks to prepare and send you
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the invoice. If you request an invoice in August, you **will not** receive it
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before September due to summer holidays in Spain. If you need it earlier to
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process a payment by bank transfer, we recommend paying your registration by
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credit card.
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<p>After the conference, we will provide certificates of attendance. For further inquiries related to conference registration, please contact us at <a href="mailto:eurobioc@bioconductor.org">eurobioc@bioconductor.org</a>.</p>
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<h2 class="anchored" data-anchor-id="travel-and-accommodation">Travel and accommodation</h2>
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<p>Please consult the page on <a href="../pages/travel-information.html">travel information</a></p>
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<p>Please consult the page on <a href="../pages/travel-information.html">travel information</a>.</p>
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