DESCRIPTION

Package: annotation
Title: Genomic Annotation Resources
Version: 1.35.1
Date: 2026-04-06
Encoding: UTF-8
Authors@R: c(person(role="aut", "Marc", "RJ Carlson", email = "mrjc42@gmail.com"),
            person(role="aut", "Hervé", "Pagès", email = "hpages.on.github@gmail.com"),
            person(role="aut", "Sonali", "Arora", email = "sarora@fredhutch.org"),
            person(role="aut", "Valerie", "Obenchain", email = "valerie.obenchain@roswellpark.org"),
            person(role="aut", "Martin", "Morgan", email = "martin.morgan@roswellpark.org"),
            person("Lori", "Shepherd", role="ctb", email = "Lori.Shepherd@roswellpark.org"),
            person(role="cre", "Bioconductor Package Maintainer", email = "maintainer@bioconductor.org"))
Description: Annotation resources make up a significant proportion of the Bioconductor
    project. And there are also a diverse set of online resources available
    which are accessed using specific packages.  This walkthrough will describe the
    most popular of these resources and give some high level examples on how to use
    them.
Depends: R (>= 3.3.0),
         GenomeInfoDb,
         VariantAnnotation,
         AnnotationHub,
         TxDb.Hsapiens.UCSC.hg19.knownGene,
         TxDb.Hsapiens.UCSC.hg38.knownGene,
         TxDb.Mmusculus.UCSC.mm10.ensGene,
         org.Hs.eg.db, org.Mm.eg.db,
         Homo.sapiens,
         BSgenome.Hsapiens.UCSC.hg19,
         biomaRt,
         BSgenome,
         TxDb.Athaliana.BioMart.plantsmart22
License: Artistic-2.0
VignetteBuilder: knitr
biocViews: AnnotationWorkflow, Workflow
Workflow: true
Suggests: knitr, rmarkdown, BiocStyle
NeedsCompilation: no
URL: http://bioconductor.org/packages/annotation