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README.md

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At the current time, the user must calculate suitable values for `B` and `H` on
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their own, and finding the best value for `kc` may require experimentation
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(optimal values are typically in the range of 2-4). Internally, the Bloom filter
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assembler divides the memory budget (`B`) equally across (`kc` + 1) Bloom
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filters, where `kc` Bloom filters are used for the cascading Bloom filter and
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one additional Bloom filter is used to track k-mers that have previously been
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included in contigs. Users are recommended to target a Bloom filter false
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positive rate (FPR) that is less than 5%, as reported by the assembly log when
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using the `v=-v` option (verbose level 1).
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assembler allocates the entire memory budget (`B`) to a Counting Bloom filter,
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and an additional (`B/8`) memory to another Bloom filter that is used to track
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k-mers that have previously been included in contigs. Users are recommended to
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target a Bloom filter false positive rate (FPR) that is less than 5%, as reported
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by the assembly log when using the `v=-v` option (verbose level 1).
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Assembling using a paired de Bruijn graph
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=========================================

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