Creating a file for describing how to make custom patients in simglucose

Author: RobotPsychologist

meal_identification/references/simglucose_custom_patient.md

@@ -0,0 +1,38 @@
+# Parameter Data Dictionary
+
+## Quest
+- CR: carbs ratio (CR)
+- CF: correction factor (CF)
+- TDI: Total Daily Insulin
+- Age: Age of the patient
+
+## Pump Parameters
+- min_bolus: the minimum amount of bolus a pump can administer
+- max_bolus: the maximum amount of bolus a pump can administer
+- inc_bolus: the increment amount of bolus
+- min_basal: the minimum amount of basal insulin the pump can administer
+- max_basal: the maximum amount of basal insulin the pump can administer
+- inc_basal: the increment amount of basal
+- sample_time: how often the pump receives a reading.
+
+## Sensor Parameters
+### Johnson_S_U
+These parameters add noise to the CGM readings
+- johnson_SU (xi + lam * np.sinh((x - gamma) / delta)): https://www.jstor.org/stable/2332539?origin=crossref&seq=4
+- PACF: Partial Autocorrelation Function
+- gamma: (affect only the expected value (or other central measure) of the distribution of) parameter in the johnson_SU function.
+- lambda: (distribution shape) parameter in the johnson_SU function
+- delta: (The scale factor) parameter in the johnson_SU function
+- xi: (distribution shape) parameter in the johnson_SU function
+
+### CGM Sensor
+- sample_time: how often the sensor samples (provides a cgm reading)
+- min: minimum value of the sensor
+- max: maximum value of the sensor
+
+## Patient Parameters
+- i: does not seem to be used anywhere obvious
+- x0_1:
+- BW: Body Weight
+-
+-