[Caution] Infinite loop when input data is located inside the script directory.

[davidtong28]

runner_personal.py will copy the script directory to the directory of the input directory containing fasta files. This includes everything currently within that directory.
I was not aware of this during my first run. I cloned the Test_data directly to the directory containing scripts.
During the test run, the Test_data was copied over and over again, nearly destroying the file system.

[RiescoR]

Yeah, I had the same problem a few years back. I actualy resolved the issue before realizing that the best answer was to put the data outside the conspecifix directory. It will bloat your hardrive and/or reach the maximum writing path length...
This is the link to the issue:
#4
I think they never patch the issue, though

[davidtong28]

Thank you for the feedback.
This fatal bug can be easily avoided by adding one line of sanity check to fail any running attempts involving input data inside the script directory. However, it seems like this repository is no longer under maintenance. I will leave this issue open and hopefully new users can avoid this after reading.