starcluster-ami.json

{
  "variables": {
    "aws_access_key": "",
    "aws_secret_key": "",
    "source_ami": "ami-7b89cc11"
  },
  "builders": [{
    "type": "amazon-ebs",
    "access_key": "{{user `aws_access_key`}}",
    "secret_key": "{{user `aws_secret_key`}}",
    "region": "us-east-1",
    "source_ami": "{{user `source_ami`}}",
    "instance_type": "c3.large",
    "ssh_username": "ubuntu",
    "ami_name": "StarCluster AMI (Ubuntu 14.04 LTS {{timestamp}})",
    "enhanced_networking": true
  }],
  "provisioners": [{
    "type": "shell",
    "inline": [
      "sleep 30",
      "sudo apt-get -y update",
      "sudo apt-get -y upgrade",

      "sudo apt-get -y install build-essential git parallel",

      "sudo apt-get install -y nfs-kernel-server nfs-common rpcbind upstart",
      "sudo ln -s /etc/init.d/nfs-kernel-server /etc/init.d/nfs",
      "sudo ln -s /lib/systemd/system/nfs-kernel-server.service /lib/systemd/system/nfs.service",
      "sudo ln -s /lib/init/upstart-job /etc/init.d/portmap",
      "sudo ln -s /lib/init/upstart-job /etc/init.d/portmap-wait",

      "curl -L https://github.com/brunogrande/starcluster-ami-config/blob/master/sge.tar.gz?raw=true | sudo tar -xz -C /opt/",

      "sudo sh -c 'echo deb http://www.duinsoft.nl/pkg debs all > /etc/apt/sources.list.d/duinsoft.list'",
      "sudo apt-key adv --keyserver keys.gnupg.net --recv-keys 0xE18CE6625CB26B26",
      "sudo apt-get -y update",
      "sudo apt-get -y install update-sun-jre",

      "sudo sh -c 'echo deb http://cran.stat.sfu.ca/bin/linux/ubuntu trusty/ > /etc/apt/sources.list.d/cran.list'",
      "sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9",
      "sudo apt-get -y update",
      "sudo apt-get -y install r-base r-base-dev",

      "sudo apt-get -y install python-pip",
      "sudo pip install kronos-pipeliner"
    ]
  }]
}