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Package: cellTypeCompositions
Date: 2022-06-07
Version: 0.1.18
License: GPL (>= 2) | file LICENSE
Description: Estimate cell type compositions from a table of clone
by cell type counts. Functions are provided for exploring the cell
type compositions that are displayed by cell lineages. The
workhorse is a function that performs blocked Gibbs sampling on the
cell type frequencies in a parent population under a model that
assumes a vague prior for the total number of cells and a uniform
Dirichlet prior for the proportions fo different cell types.
Title: Cell Type Compositions Gibbs Sampler
Author: Charles Berry
Maintainer: Charles Berry <ccberry@ucsd.edu>
RoxygenNote: 7.1.0
Imports: Rcpp (>= 0.12.16)
LinkingTo: Rcpp, RcppArmadillo