Modernize package and add actions

Author: alejoe91

.github/workflows/full_tests.yml

@@ -0,0 +1,26 @@
+name: Test on Ubuntu
+
+on:
+  pull_request:
+      branches: [dev]
+      types: [synchronize, opened, reopened]
+
+
+jobs:
+  build-and-test:
+
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v3
+    - name: Set up Python
+      uses: actions/setup-python@v4
+      with:
+        python-version: "3.10"
+    - name: Install package
+      run: |
+        python -m pip install --upgrade pip
+        pip install .[test]
+    - name: Pytest
+      run: |
+        pytest -v

.github/workflows/publish-to-pypi.yml

@@ -0,0 +1,28 @@
+name: Release to PyPI
+
+on:
+  push:
+    tags:
+       - '*'
+jobs:
+  release:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v2
+    - name: Set up Python 3.10
+      uses: actions/setup-python@v4
+      with:
+        python-version: "3.10"
+    - name: Install Tools
+      run: |
+        python -m pip install --upgrade pip
+        pip install setuptools wheel twine build
+    - name: Package and Upload
+      env:
+        STACKMANAGER_VERSION: ${{ github.event.release.tag_name }}
+        TWINE_USERNAME: __token__
+        TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }}
+      run: |
+        python -m build --sdist --wheel
+        twine upload dist/*

.pre-commit-config.yaml

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+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.5.0
+    hooks:
+      - id: fix-encoding-pragma
+        exclude: tests/test_data
+      - id: trailing-whitespace
+        exclude: tests/test_data
+      - id: end-of-file-fixer
+        exclude: tests/test_data
+      - id: check-docstring-first
+      - id: debug-statements
+      - id: check-toml
+      - id: check-yaml
+        exclude: tests/test_data
+      - id: requirements-txt-fixer
+      - id: detect-private-key
+      - id: check-merge-conflict
+
+  - repo: https://github.com/psf/black
+    rev: 24.4.2
+    hooks:
+      - id: black
+        exclude: tests/test_data
+      - id: black-jupyter
+
+  - repo: https://github.com/pycqa/isort
+    rev: 5.13.2
+    hooks:
+      - id: isort
+        args: ["--profile", "black"]
+
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.4.4
+    hooks:
+      - id: ruff

pyproject.toml

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+[project]
+name = "spatial_maps"
+version = "0.2.0"
+authors = [
+    { name = "Mikkel Lepperod", email = "[email protected]" },
+    { name = "Alessio Buccino", email = "[email protected]" },
+]
+
+description = "Compute spatial maps for neural data."
+readme = "README.md"
+requires-python = ">=3.10"
+classifiers = [
+    "Programming Language :: Python :: 3",
+    "License :: OSI Approved :: MIT License",
+    "Operating System :: OS Independent",
+]
+
+dependencies = [
+    "numpy"<2,
+    "scipy",
+    "astropy",
+    "pandas",
+    "elephant",
+    "matplotlib"
+]
+
+[project.urls]
+homepage = "https://github.com/CINPLA/spatial-maps"
+repository = "https://github.com/CINPLA/spatial-maps"
+
+[build-system]
+requires = ["setuptools>=62.0"]
+build-backend = "setuptools.build_meta"
+
+[tool.setuptools]
+include-package-data = true
+
+[tool.setuptools.packages.find]
+where = ["src"]
+include = ["spatial_maps*"]
+namespaces = false
+
+[project.optional-dependencies]
+dev = ["pre-commit", "black[jupyter]", "isort", "ruff"]
+test = ["pytest", "pytest-cov", "pytest-dependency", "mountainsort5"]
+docs = ["sphinx-gallery", "sphinx_rtd_theme"]
+full = [
+    "spatial_maps[dev]",
+    "spatial_maps[test]",
+    "spatial_maps[docs]",
+]
+
+[tool.coverage.run]
+omit = ["tests/*"]
+
+[tool.black]
+line-length = 120