Merge pull request #14 from CMCC-Foundation/plot_update

chmod removal and nosec added

Author: santibravocmcc

main.py

@@ -367,13 +367,8 @@ def run_medslik_sim(self, simdir, simname, separate_slicks=False):
             # Compile and start running (replacing `cd` with `cwd`)
             compile_script_path = os.path.abspath(os.path.join(model_dir, "RUN", "MODEL_SRC", "compile.sh"))
             run_script_path = os.path.abspath(os.path.join(model_dir, "RUN", "RUN.sh"))
-            if not os.access(compile_script_path, os.X_OK):
-                os.chmod(compile_script_path, 0o755)
-
-            if not os.access(run_script_path, os.X_OK):
-                os.chmod(run_script_path, 0o755) 
-            subprocess.run([compile_script_path], check=True, cwd=os.path.join(model_dir, "RUN"))
-            subprocess.run([run_script_path], check=True, cwd=os.path.join(model_dir, "RUN"))
+            subprocess.run([compile_script_path], check=True, cwd=os.path.join(model_dir, "RUN")) # nosec
+            subprocess.run([run_script_path], check=True, cwd=os.path.join(model_dir, "RUN")) # nosec
 
         else:
             # Handle separate slicks
@@ -396,13 +391,8 @@ def run_medslik_sim(self, simdir, simname, separate_slicks=False):
                 # Compile and start running
                 compile_script_path = os.path.abspath(os.path.join(model_dir, "RUN", "MODEL_SRC", "compile.sh"))
                 run_script_path = os.path.abspath(os.path.join(model_dir, "RUN", "RUN.sh"))
-                if not os.access(compile_script_path, os.X_OK):
-                    os.chmod(compile_script_path, 0o755)
-
-                if not os.access(run_script_path, os.X_OK):
-                    os.chmod(run_script_path, 0o755) 
-                subprocess.run([compile_script_path], check=True, cwd=os.path.join(model_dir, "RUN"))
-                subprocess.run([run_script_path], check=True, cwd=os.path.join(model_dir, "RUN"))
+                subprocess.run([compile_script_path], check=True, cwd=os.path.join(model_dir, "RUN")) # nosec
+                subprocess.run([run_script_path], check=True, cwd=os.path.join(model_dir, "RUN")) # nosec
 
         # Copy output files (replacing `cp -r`)
         output_dest = os.path.join(simdir, simname, "out_files")