Merge pull request #10 from COMBINE-lab/develop

rob-p · web-flow · commit 1b214ee3bc24 · 2022-10-23T17:17:03.000-04:00
Develop
diff --git a/setup.cfg b/setup.cfg
@@ -1,6 +1,6 @@
 [metadata]
 name = pyroe
-version = 0.6.3
+version = 0.6.4
 author = Dongze He, Rob Patro
 author_email = dhe17@umd.edu, rob@cs.umd.edu
 description = utilities of alevin-fry
diff --git a/src/pyroe/__init__.py b/src/pyroe/__init__.py
@@ -1,4 +1,4 @@
-__version__ = "0.6.3"
+__version__ = "0.6.4"
 
 from pyroe.load_fry import load_fry
 from pyroe.make_splici_txome import make_splici_txome
diff --git a/src/pyroe/make_splici_txome.py b/src/pyroe/make_splici_txome.py
@@ -400,7 +400,7 @@ def check_bedtools_version(bt_check_path):
     filename_prefix = filename_prefix + "_fl" + str(flank_length)
     out_fa = os.path.join(output_dir, filename_prefix + ".fa")
     out_t2g3col = os.path.join(output_dir, filename_prefix + "_t2g_3col.tsv")
-    id2name_path = os.path.join(output_dir, "gene_name_to_id.tsv")
+    id2name_path = os.path.join(output_dir, "gene_id_to_name.tsv")
 
     # load gtf
     try:

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-__version__ = "0.6.3"`
	`1`	`+__version__ = "0.6.4"`
`2`	`2`
`3`	`3`	`from pyroe.load_fry import load_fry`
`4`	`4`	`from pyroe.make_splici_txome import make_splici_txome`