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- document the purpose of the BG mask file
-> documented in the commit bd6ecb3 .
- add a code that tests that BG and FG/TRA masks are not overlapping
-> from its early days, there is a log
[INFO] BG&FG overlapping voxels: ....some number...
which essentially does exactly that.
- consider if there is a way to compute BG automatically from --> e.g. consistent (morphologically opened?) are of pixels that never part of any FG/TRA masks/marker
-> a BGmask creator that can also function as described has been added in commit 43ce09f
- add "whole embryo detector"
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