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99* Updated ensembl vep to version 113.4 https://github.com/Clinical-Genomics/BALSAMIC/pull/1567
1010* Updated rank model to use GNOMADAF_popmax instead of deprecated gnomAD_AF https://github.com/Clinical-Genomics/BALSAMIC/pull/1567
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11+ * Updated balsamic installation instructions https://github.com/Clinical-Genomics/BALSAMIC/pull/1599
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Original file line number Diff line number Diff line change @@ -24,7 +24,7 @@ Step 1. Installing BALSAMIC
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27- conda create -c conda-forge -c defaults --name S_balsamic python== 3.11 pip pygraphviz wkhtmltopdf
27+ conda create --name S_balsamic -c conda-forge python=3.11 pip "cython<3" pygraphviz wkhtmltopdf
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30302. Activate environment:
@@ -39,7 +39,7 @@ Step 1. Installing BALSAMIC
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42- pip install --no-cache-dir -U git+https://github.com/Clinical-Genomics/BALSAMIC
42+ pip install --no-build-isolation --no- cache-dir -U git+https://github.com/Clinical-Genomics/BALSAMIC
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