oncorefiner/modules.json at dev · Clinical-Genomics/oncorefiner · GitHub

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{
    "name": "Clinical-Genomics/oncorefiner",
    "homePage": "https://github.com/Clinical-Genomics/oncorefiner",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bcftools/annotate": {
                        "branch": "master",
                        "git_sha": "3d9c2f4beaa4f62b3f006928fd9095a496d1e5a8",
                        "installed_by": ["modules"]
                    },
                    "bcftools/filter": {
                        "branch": "master",
                        "git_sha": "6383d8fe58f9498eecd5aa303e71a4a932d1e9f6",
                        "installed_by": ["modules"]
                    },
                    "bcftools/index": {
                        "branch": "master",
                        "git_sha": "6383d8fe58f9498eecd5aa303e71a4a932d1e9f6",
                        "installed_by": ["modules"]
                    },
                    "bcftools/view": {
                        "branch": "master",
                        "git_sha": "6383d8fe58f9498eecd5aa303e71a4a932d1e9f6",
                        "installed_by": ["modules"]
                    },
                    "cadd": {
                        "branch": "master",
                        "git_sha": "64ab14a6905e5c9d649f61e2757a1e600dbdb8e0",
                        "installed_by": ["modules"]
                    },
                    "ensemblvep/vep": {
                        "branch": "master",
                        "git_sha": "34505e1fc5e9f4fd641210ca440acff6bd33b842",
                        "installed_by": ["modules"]
                    },
                    "gawk": {
                        "branch": "master",
                        "git_sha": "c0da8f3a26835d663873001382a708f75766fec6",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "008f9d3e61209bf995edac3ba531f54e269e1215",
                        "installed_by": ["modules"]
                    },
                    "samtools/view": {
                        "branch": "master",
                        "git_sha": "2057a0a8dbd67000d08613a556570aa7184a7c89",
                        "installed_by": ["modules"]
                    },
                    "svdb/query": {
                        "branch": "master",
                        "git_sha": "7d09b5f86908bdd951e42aef9994ad5bb0f6c307",
                        "installed_by": ["modules"]
                    },
                    "tabix/tabix": {
                        "branch": "master",
                        "git_sha": "524a7d5ef99a0cbfb4feec8bf7062eb6a531931a",
                        "installed_by": ["modules"]
                    },
                    "tiddit/cov": {
                        "branch": "master",
                        "git_sha": "c00e3ab203bdbce7a6ed6b9cd0a3f6406e2f3d8b",
                        "installed_by": ["modules"]
                    },
                    "untar": {
                        "branch": "master",
                        "git_sha": "447f7bc0fa41dfc2400c8cad4c0291880dc060cf",
                        "installed_by": ["modules"]
                    },
                    "vcf2cytosure": {
                        "branch": "master",
                        "git_sha": "2ad28db4a5a82972c1210dfa7c85f035bb80c4de",
                        "installed_by": ["modules"]
                    },
                    "vcfanno": {
                        "branch": "master",
                        "git_sha": "2ad28db4a5a82972c1210dfa7c85f035bb80c4de",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "a3fb7351b1fdb2b1de282b765816bbea190e86a8",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "fdc08b8b1ae74f56686ce21f7ea11ad11990ce57",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}