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This repository was archived by the owner on Nov 10, 2025. It is now read-only.
This repository was archived by the owner on Nov 10, 2025. It is now read-only.

Implement --shape-update-method #62

@gdevenyi

Description

@gdevenyi

Add choices for shape update method.

  1. ants, average transforms and apply scaled pseudo-inverse to intensity average
  2. none perform no shape update, forward-only registration
  3. fonov aka OMM-1 method, average forward transforms, invert, apply forward-transform composed with average inverse before intensity average step

https://www.biorxiv.org/content/10.1101/2023.11.30.569378v1.full.pdf

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