ci: allow running notebooks through tox doclive (#225)

* ci: add more --re-ignores to sphinx-autobuild
* ci: equalize tox.ini with expertsystem

Author: redeboer

tox.ini

@@ -43,12 +43,21 @@ description =
 allowlist_externals =
     sphinx-autobuild
 passenv =
+    EXECUTE_NB
     TERM
 commands =
     sphinx-autobuild \
         --watch docs \
         --watch src \
+        --re-ignore .*/.ipynb_checkpoints/.* \
+        --re-ignore .*/__pycache__/.* \
+        --re-ignore docs/.*\.csv \
+        --re-ignore docs/.*\.gv \
         --re-ignore docs/.*\.inv \
+        --re-ignore docs/.*\.json \
+        --re-ignore docs/.*\.pickle \
+        --re-ignore docs/.*\.yaml \
+        --re-ignore docs/.*\.yml \
         --re-ignore docs/_build/.* \
         --re-ignore docs/api/.* \
         --open-browser \
@@ -136,6 +145,7 @@ ignore = # more info: https://www.flake8rules.com/
     W503 # https://github.com/psf/black#line-breaks--binary-operators
 rst-roles =
     attr,
+    cite,
     class,
     doc,
     download,
@@ -148,6 +158,8 @@ rst-directives =
     deprecated,
     envvar,
     exception,
+    glue:figure,
+    glue:math,
     seealso,
 
 [pydocstyle]