CompOmics
diff --git a/‎ParseInput.cs‎
Lines changed: 0 additions & 1 deletion b/‎ParseInput.cs‎
Lines changed: 0 additions & 1 deletion
diff --git a/‎Query/ProxiSpectrumReader.cs‎
Lines changed: 1 addition & 1 deletion b/‎Query/ProxiSpectrumReader.cs‎
Lines changed: 1 addition & 1 deletion
diff --git a/‎ThermoRawFileParserTest/Data/TestFolderMgfs/NOTRAWFILE‎
Lines changed: 0 additions & 1 deletion b/‎ThermoRawFileParserTest/Data/TestFolderMgfs/NOTRAWFILE‎
Lines changed: 0 additions & 1 deletion
diff --git a/‎ThermoRawFileParserTest/Data/TestFolderMgfs/small1.RAW‎
-1.43 MB b/‎ThermoRawFileParserTest/Data/TestFolderMgfs/small1.RAW‎
-1.43 MB
diff --git a/‎ThermoRawFileParserTest/Data/TestFolderMgfs/small2.RAW‎
-1.43 MB b/‎ThermoRawFileParserTest/Data/TestFolderMgfs/small2.RAW‎
-1.43 MB
diff --git a/‎ThermoRawFileParserTest/ThermoRawFileParserTest.csproj‎
Lines changed: 0 additions & 9 deletions b/‎ThermoRawFileParserTest/ThermoRawFileParserTest.csproj‎
Lines changed: 0 additions & 9 deletions
diff --git a/‎ThermoRawFileParserTest/WriterTests.cs‎
Lines changed: 196 additions & 56 deletions b/‎ThermoRawFileParserTest/WriterTests.cs‎
Lines changed: 196 additions & 56 deletions
@@ -151,7 +151,6 @@ public ParseInput(string rawFilePath, string rawDirectoryPath, string outputDire
             RawDirectoryPath = rawDirectoryPath;
             OutputDirectory = outputDirectory;
             OutputFormat = outputFormat;
-            MgfPrecursor = true;
         }
 
         public void InitializeS3Bucket()
 
@@ -256,7 +256,7 @@ public List<ProxiSpectrum> Retrieve()
                         }
                         else
                         {
-                            throw ex;
+                            throw;
                         }
                     }
                 }
 
@@ -52,15 +52,6 @@
     <None Update="Data\small2.RAW">
       <CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
     </None>
-    <None Update="Data\TestFolderMgfs\NOTRAWFILE">
-      <CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
-    </None>
-    <None Update="Data\TestFolderMgfs\small1.RAW">
-      <CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
-    </None>
-    <None Update="Data\TestFolderMgfs\small2.RAW">
-      <CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
-    </None>
     <None Update="Data\xic_in.json">
       <CopyToOutputDirectory>PreserveNewest</CopyToOutputDirectory>
     </None>
Original file line number	Diff line number	Diff line change
`@@ -151,7 +151,6 @@ public ParseInput(string rawFilePath, string rawDirectoryPath, string outputDire`
`151`	`151`	`RawDirectoryPath = rawDirectoryPath;`
`152`	`152`	`OutputDirectory = outputDirectory;`
`153`	`153`	`OutputFormat = outputFormat;`
`154`		`- MgfPrecursor = true;`
`155`	`154`	`}`
`156`	`155`
`157`	`156`	`public void InitializeS3Bucket()`
Original file line number	Diff line number	Diff line change
`@@ -256,7 +256,7 @@ public List<ProxiSpectrum> Retrieve()`
`256`	`256`	`}`
`257`	`257`	`else`
`258`	`258`	`{`
`259`		`- throw ex;`
	`259`	`+ throw;`
`260`	`260`	`}`
`261`	`261`	`}`
`262`	`262`	`}`