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additional support for ms2rescore refactoring #60

additional support for ms2rescore refactoring

additional support for ms2rescore refactoring #60

Triggered via pull request January 19, 2026 11:14
Status Failure
Total duration 4m 6s
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test.yml

on: pull_request
Matrix: pytest
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13 errors and 4 warnings
clippy_check
The process '/home/runner/.cargo/bin/cargo' failed with exit code 101
clippy_check
could not compile `ms2rescore-rs` (lib test) due to 5 previous errors
clippy_check: src/ms2pip_features.rs#L364
use of deprecated associated function `pyo3::types::PyModule::import_bound`: renamed to `PyModule::import`
clippy_check: src/ms2pip_features.rs#L63
type annotations needed
clippy_check: src/ms2pip_features.rs#L59
no method named `readonly` found for reference `&numpy::PyArray<f32, numpy::ndarray::Dim<[usize; 1]>>` in the current scope
clippy_check: src/ms2pip_features.rs#L58
the trait bound `&PyArray<f32, Dim<[usize; 1]>>: FromPyObjectBound<'_, '_>` is not satisfied
clippy_check: src/ms2pip_features.rs#L58
the trait bound `&PyArray<f32, Dim<[usize; 1]>>: FromPyObjectBound<'_, '_>` is not satisfied
clippy_check: src/parse_mzdata.rs#L28
no function or associated item named `default` found for struct `precursor::Precursor` in the current scope
pytest (ubuntu-latest)
Process completed with exit code 1.
pytest (windows-latest)
The strategy configuration was canceled because "pytest.ubuntu-latest" failed
pytest (windows-latest)
The operation was canceled.
pytest (macos-latest)
The strategy configuration was canceled because "pytest.ubuntu-latest" failed
pytest (macos-latest)
The operation was canceled.
clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
clippy_check
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/