Reload from disk does not clear edited flag

### Describe the bug

When a script is modified outside the editor, pressing "Reload from disk" on the pop-up does not clear the edited flag.

### Expected behavior

_No response_

### Actual behavior

_No response_

### How to Reproduce?

_No response_

### Godot full version

_No response_

### Orchestrator version

2.5/2.4/2.3/2.2

### Additional information

_No response_