updated axioms

Author: lschriml

src/ontology/doid-edit.owl

@@ -66975,7 +66975,7 @@ SubClassOf(obo:DOID_0081241 ObjectSomeValuesFrom(obo:IDO_0000664 obo:GENO_000014
 
 # Class: obo:DOID_0081242 (autoimmune interstitial lung, joint, and kidney disease)
 
-AnnotationAssertion(Annotation(oboInOwl:hasDbXref "url:https://pubmed.ncbi.nlm.nih.gov/25894502/") Annotation(oboInOwl:hasDbXref "url:https://rarediseases.org/rare-diseases/copa-syndrome/") obo:IAO_0000115 obo:DOID_0081242 "A syndrome that is characterized by interstitial lung disease, inflammatory arthritis, and immune complex-mediated renal disease and that has_material_basis_in heterozygous mutation in the COPA gene on chromosome 1q23.")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "url:https://pubmed.ncbi.nlm.nih.gov/25894502/") Annotation(oboInOwl:hasDbXref "url:https://rarediseases.org/rare-diseases/copa-syndrome/") obo:IAO_0000115 obo:DOID_0081242 "An autoimmune disease that is characterized by interstitial lung disease, inflammatory arthritis, and immune complex-mediated renal disease and that has_material_basis_in heterozygous mutation in the COPA gene on chromosome 1q23.")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0081242 "MIM:616414")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0081242 "ORDO:444092")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:DOID_0081242 "Autoimmune interstitial lung disease-arthritis syndrome")
@@ -66986,6 +66986,8 @@ AnnotationAssertion(oboInOwl:id obo:DOID_0081242 "DOID:0081242")
 AnnotationAssertion(oboInOwl:inSubset obo:DOID_0081242 doid:DO_rare_slim)
 AnnotationAssertion(rdfs:label obo:DOID_0081242 "autoimmune interstitial lung, joint, and kidney disease")
 SubClassOf(obo:DOID_0081242 obo:DOID_225)
+SubClassOf(obo:DOID_0081242 obo:DOID_417)
+SubClassOf(obo:DOID_0081242 ObjectIntersectionOf(obo:DOID_4 ObjectSomeValuesFrom(obo:RO_0004019 obo:SYMP_0000462)))
 SubClassOf(obo:DOID_0081242 ObjectSomeValuesFrom(obo:IDO_0000664 obo:GENO_0000147))
 SubClassOf(obo:DOID_0081242 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701))
 SubClassOf(obo:DOID_0081242 ObjectSomeValuesFrom(obo:RO_0004029 obo:DOID_3082))
@@ -100877,11 +100879,11 @@ SubClassOf(obo:DOID_0112055 ObjectSomeValuesFrom(obo:IDO_0000664 obo:GENO_000014
 AnnotationAssertion(Annotation(dc:type obo:ECO_0007645) Annotation(oboInOwl:hasDbXref "url:https://pubmed.ncbi.nlm.nih.gov/26166480/") obo:IAO_0000115 obo:DOID_0112056 "A syndromic X-linked intellectual disability characterized by borderline to severe intellectual disability often associated with speech delay, short stature, elevated body mass index, and a truncal obesity pattern in older males that has_material_basis_in hemizygous mutation in the THOC2 gene on chromosome Xq25.")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0112056 "MIM:300957")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0112056 "ORDO:457240")
+AnnotationAssertion(oboInOwl:hasExactSynonym obo:DOID_0112056 "Kumar type of X-linked syndromic intellectual developmental disorder")
 AnnotationAssertion(Annotation(oboInOwl:hasSynonymType obo:OMO_0003012) oboInOwl:hasExactSynonym obo:DOID_0112056 "MRX12")
 AnnotationAssertion(Annotation(oboInOwl:hasSynonymType obo:OMO_0003012) oboInOwl:hasExactSynonym obo:DOID_0112056 "MRX35")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:DOID_0112056 "X-linked mental retardation 12")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:DOID_0112056 "X-linked mental retardation 35")
-AnnotationAssertion(oboInOwl:hasExactSynonym obo:DOID_0112056 "Kumar type of X-linked syndromic intellectual developmental disorder")
 AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_0112056 "disease_ontology")
 AnnotationAssertion(oboInOwl:id obo:DOID_0112056 "DOID:0112056")
 AnnotationAssertion(oboInOwl:inSubset obo:DOID_0112056 doid:DO_rare_slim)
@@ -113394,7 +113396,7 @@ SubClassOf(obo:DOID_11038 obo:DOID_10935)
 
 # Class: obo:DOID_11042 (Felty's syndrome)
 
-AnnotationAssertion(Annotation(dc:type obo:ECO_0007638) Annotation(dc:type obo:ECO_0007640) Annotation(oboInOwl:hasDbXref "url:http://en.wikipedia.org/wiki/Felty%27s_syndrome") Annotation(oboInOwl:hasDbXref "url:http://www.nlm.nih.gov/medlineplus/ency/article/000445.htm") obo:IAO_0000115 obo:DOID_11042 "A syndrome that results_in rheumatoid arthritis, splenomegaly and neutropenia.")
+AnnotationAssertion(Annotation(dc:type obo:ECO_0007638) Annotation(dc:type obo:ECO_0007640) Annotation(oboInOwl:hasDbXref "url:http://en.wikipedia.org/wiki/Felty%27s_syndrome") Annotation(oboInOwl:hasDbXref "url:http://www.nlm.nih.gov/medlineplus/ency/article/000445.htm") obo:IAO_0000115 obo:DOID_11042 "An autoimmune disease that results_in rheumatoid arthritis, splenomegaly and neutropenia.")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_11042 "GARD:8234")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_11042 "ICD10CM:M05.0")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_11042 "ICD9CM:714.1")
@@ -113411,7 +113413,7 @@ AnnotationAssertion(oboInOwl:inSubset obo:DOID_11042 doid:DO_rare_slim)
 AnnotationAssertion(oboInOwl:inSubset obo:DOID_11042 doid:NCIthesaurus)
 AnnotationAssertion(rdfs:comment obo:DOID_11042 "OMIM mapping confirmed by DO. [SN].")
 AnnotationAssertion(rdfs:label obo:DOID_11042 "Felty's syndrome")
-SubClassOf(obo:DOID_11042 obo:DOID_225)
+SubClassOf(obo:DOID_11042 obo:DOID_417)
 SubClassOf(obo:DOID_11042 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701))
 
 # Class: obo:DOID_11044 (gastroschisis)
@@ -165741,7 +165743,6 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_417 "disease_ontology")
 AnnotationAssertion(oboInOwl:id obo:DOID_417 "DOID:417")
 AnnotationAssertion(rdfs:comment obo:DOID_417 "Xref MGI.")
 AnnotationAssertion(rdfs:label obo:DOID_417 "autoimmune disease")
-EquivalentClasses(obo:DOID_417 ObjectIntersectionOf(obo:DOID_4 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701)))
 SubClassOf(obo:DOID_417 obo:DOID_2914)
 
 # Class: obo:DOID_4170 (obsolete localized resectable neuroblastoma)