README.md

Local Installation & Verification Setup

Ensure you have Python 3.8+ installed in your environment. Clone the repository and install the verified biophysics dependencies:

git clone https://github.com
cd pediatric-mri-motion-reconstruction
pip install -r requirements.txt

1. Compiling the Sequence

To compile the raw 2D slice-selective center-out radial trajectory and export the hardware-aligned scanner file, execute:

python main.py

Expected Output: Success! Perfect pulse sequence file exported to: pediatric_silent_radial.seq

2. Running the Safety Check & Trajectory Mapping

To audit the structural timing thresholds and generate spatial trajectory verification scatter plots, run:

python verify_sequence_trajectory.py

Expected Output: Prints SUCCESS: Sequence timing and gradient limits are structurally safe. and saves the coordinate plot matrix report as sequence_verification_report.png.