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Releases: Donders-Institute/bidscoin

Nothing to see, please move on :-)

31 May 16:41
c0c7184

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Fixed

Removed the redundant importlib dependency from the requirements (could cause an installation error)

Thanks @marcpabst for reporting!

Nobody likes testing :-)

21 May 08:28

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Fixed

Just a small bugfix release that prevents a possible bidscoiner crash for certain data acquisitions (e.g. for multi-echo data). It should be a safe upgrade for everyone using 3.6.0 (you can edit the 3.6.0 version string in the Options to 3.6.1 to get rid of the version conflict warning)

I used regexps to solve my problem -- now I have two problems :-p

13 May 20:49

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Added

  • Support for BIDS v1.6.0 (-> PET)
  • Separate tabs for DICOM and PAR to edit all the mappings of mixed datasets in a single bidseditor session
  • Run-item matching on filesystem properties, i.e. on the pathname, filename and filesize and nr of files in the folder. This can be used in conjunction with the (DICOM/PAR) attributes
  • A meta-data dictionary that can be edited with the bidseditor and that will be added to the json sidecar files by the bidscoiner
  • More user feedback in the GUI for new BIDS-compliancy checks on missing or invalid bids data
  • A right-click menu option to remove a run-item from the bidsmap (advanced usage)
  • The option to load a new bidsmap in the bidseditor
  • Enable the user to edit json, yaml, tsv and other non-DICOM / non-PAR files with double-clicks in the data browser
  • A central 'bidscoin' package function with various utilities, such as listing and installing BIDScoin plugins or executables
  • Plugins can have their own 'test' routine that can be called from the bidseditor

Changed

  • Using regular expressions instead of fnmatch to match (template bidsmap) attribute values. This makes the templates more powerful and flexible
  • Moved the bidsmapping and bidscoining functionality to stand-alone plugins (changed API), making plugins a first-class BIDScoin citizen
  • The plugins have moved to the bidsmap['Options'], where they have their own key-value options dictionary (changed API)
  • Move IntendedFor field over to the new meta-data dictionary
  • Renamed the leave_out datatype to exclude
  • Re-introduced skipping hidden folders (hidden files are also skipped)
  • Moved the 'pulltutorial' function over to the new 'bidscoin' function

Removed

  • P7 and nifti support (it was never implemented anyhow)
  • The option to edit new mappings on-the-fly in the bidsmapper (-i 2)

Who likes derivatives anyhow :-)

13 Apr 15:08

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Fixed

  • Save non-standard fieldmaps in the derivative folder

Need for speed 2

21 Mar 22:38

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Fixed:

  • pypi upload

Need for speed

21 Mar 21:59

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Added

  • BIDScoin version update checks

Fixed

  • Speed optimizations
  • Code clean-up
  • More robust dcm2niix output handling

I just love how the new BIDS and pieces come together :-)

09 Mar 10:20

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A significant rewrite and evolution of BIDScoin!

Added

  • Support for BIDS v1.5
  • Support for Siemens advanced physiological logging data
  • Improved GUI help tooltips and user feedback
  • Improved feedback and control for invalid bidsnames
  • Validation of run-items and bidsmaps against the BIDS schema

Changed

  • Use the dccn template bidsmap as the default

Fixed

  • Simplified and improved (hopefully) handling of fieldmaps

You are looking good today, keep it up! :-)

28 Sep 15:37

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More summer love

05 Aug 21:50

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Fixed

  • Minor but important bugfix in the setup :-)

Summer love

05 Aug 21:43

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Added

  • A download tool for tutorial data
  • A tool for regenerating the participants.tsv file

Fixed

  • Various bugs