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Add run scripts for SCREAMv1 Four Seasons simulations.
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‎run_scripts/SCREAMv1/FourSeasons/run.production.ne1024pg2_screamv1.Apr.sh‎

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#!/bin/sh -e
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#==============================================#
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# Date: 2022-12-19
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#
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# Description:
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#
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# Submission script used for a 40-day ne1024pg2
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# simulation with the DYAMOND2 configuration.
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#
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#==============================================#
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## Location of eamxx codebase
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eamxx_src=~/Code/scream
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## Location of eamxx output control files
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eamxx_out_files_root=~/Code/scream-docs
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## Location of elm namelist file to use
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elm_nl_file=$eamxx_out_files_root/v1_output/user_nl_elm_basic
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## Some provenance information
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githash_eamxx=`git --git-dir $eamxx_src/.git rev-parse HEAD`
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masterhash_eamxx=`git --git-dir $eamxx_src/.git log -n 1 --pretty=format:"%H" origin/master`
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githash_screamdocs=`git --git-dir $eamxx_out_files_root/.git rev-parse HEAD`
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masterhash_screamdocs=`git --git-dir $eamxx_out_files_root/.git log -n 1 --pretty=format:"%H" origin/master`
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## Job size information
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nnode=1024
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pernode=6
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ntask=$(($pernode * $nnode))
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## Compset and jobname information
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name=4Seasons_April
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compset=F2010-SCREAMv1
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res=ne1024pg2_ne1024pg2
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cname=$name.$res.$compset.$githash_eamxx
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## Job submission and compiler information
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queue=batch
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compiler=gnugpu
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machine=summit
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## Create new-case
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rm -rf $cname
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$eamxx_src/cime/scripts/create_newcase --case ${cname} --compset ${compset} --res ${res} \
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-mach ${machine} --compiler ${compiler} --handle-preexisting-dirs u
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## Run settings
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cd $cname
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echo "master hash for EAMxx: $masterhash_eamxx" > GIT_INFO.txt
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echo "master hash for output files: $masterhash_screamdocs" >> GIT_INFO.txt
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./xmlchange JOB_QUEUE=$queue
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./xmlchange JOB_WALLCLOCK_TIME=2:00:00
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./xmlchange STOP_OPTION=nhours
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./xmlchange STOP_N=48
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./xmlchange HIST_N=99999; ./xmlchange HIST_OPTION=nyears ;
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./xmlchange REST_N=48; ./xmlchange REST_OPTION=nhours ;
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./xmlchange AVGHIST_OPTION=nyears
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./xmlchange AVGHIST_N=1
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# Using threads for LAND
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./xmlchange NTASKS=$ntask
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./xmlchange MAX_TASKS_PER_NODE=84
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./xmlchange MAX_MPITASKS_PER_NODE=6
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./xmlchange LND_NTHRDS=14
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# Note, MPI on host
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./xmlchange SCREAM_CMAKE_OPTIONS="SCREAM_NUM_VERTICAL_LEV 128 SCREAM_NUM_TRACERS 10 HOMMEXX_MPI_ON_DEVICE Off"
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./xmlchange PIO_NETCDF_FORMAT="64bit_data"
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./xmlchange RESUBMIT=2
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./xmlchange RUN_STARTDATE="2013-04-01"
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## Setup case
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./case.setup
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## EAMxx settings
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./atmchange Scorpio::output_yaml_files=\
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${eamxx_out_files_root}/v1_output/scream_output.Cldfrac.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QcQi.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QvT.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TOMVars.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.VertIntegrals.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.HorizWinds.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QrPsPsl.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.SurfVars_128lev.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TkeOmega.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_min.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_max.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Qv_2m.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.PresLevs.yaml
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./atmchange statefreq=5184 # 2/day
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./atmchange orbital_year=-9999
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./atmchange initial_conditions::Filename=/gpfs/alpine/cli115/world-shared/e3sm_olcf/inputdata/atm/scream/init/screami_ne1024np4L128_era5-20130401-topoadj16x_20221123.nc
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## ELM settings
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cp ${elm_nl_file} user_nl_elm
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## Build and submit
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./case.build
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./case.submit

‎run_scripts/SCREAMv1/FourSeasons/run.production.ne1024pg2_screamv1.Oct.sh‎

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#!/bin/sh -e
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#==============================================#
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# Date: 2022-12-19
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#
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# Description:
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#
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# Submission script used for a 40-day ne1024pg2
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# simulation with the DYAMOND2 configuration.
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#
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#==============================================#
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## Location of eamxx codebase
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eamxx_src=~/Code/scream
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## Location of eamxx output control files
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eamxx_out_files_root=~/Code/scream-docs
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## Location of elm namelist file to use
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elm_nl_file=$eamxx_out_files_root/v1_output/user_nl_elm_20221013
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## Some provenance information
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githash_eamxx=`git --git-dir $eamxx_src/.git rev-parse HEAD`
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masterhash_eamxx=`git --git-dir $eamxx_src/.git log -n 1 --pretty=format:"%H" origin/master`
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githash_screamdocs=`git --git-dir $eamxx_out_files_root/.git rev-parse HEAD`
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masterhash_screamdocs=`git --git-dir $eamxx_out_files_root/.git log -n 1 --pretty=format:"%H" origin/master`
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## Job size information
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nnode=1024
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pernode=6
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ntask=$(($pernode * $nnode))
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## Compset and jobname information
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name=4Seasons_October
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compset=F2010-SCREAMv1
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res=ne1024pg2_ne1024pg2
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cname=$name.$res.$compset.$githash_eamxx
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## Job submission and compiler information
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queue=batch
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compiler=gnugpu
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machine=summit
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## Create new-case
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rm -rf $cname
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$eamxx_src/cime/scripts/create_newcase --case ${cname} --compset ${compset} --res ${res} \
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-mach ${machine} --compiler ${compiler} --handle-preexisting-dirs u
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## Run settings
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cd $cname
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echo "master hash for EAMxx: $masterhash_eamxx" > GIT_INFO.txt
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echo "master hash for output files: $masterhash_screamdocs" >> GIT_INFO.txt
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./xmlchange JOB_QUEUE=$queue
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./xmlchange JOB_WALLCLOCK_TIME=2:00:00
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./xmlchange STOP_OPTION=nhours
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./xmlchange STOP_N=48
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./xmlchange HIST_N=99999; ./xmlchange HIST_OPTION=nyears ;
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./xmlchange REST_N=48; ./xmlchange REST_OPTION=nhours ;
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./xmlchange AVGHIST_OPTION=nyears
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./xmlchange AVGHIST_N=1
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# Using threads for LAND
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./xmlchange NTASKS=$ntask
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./xmlchange MAX_TASKS_PER_NODE=84
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./xmlchange MAX_MPITASKS_PER_NODE=6
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./xmlchange LND_NTHRDS=14
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# Note, MPI on host
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./xmlchange SCREAM_CMAKE_OPTIONS="SCREAM_NUM_VERTICAL_LEV 128 SCREAM_NUM_TRACERS 10 HOMMEXX_MPI_ON_DEVICE Off"
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./xmlchange PIO_NETCDF_FORMAT="64bit_data"
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./xmlchange RESUBMIT=2
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./xmlchange RUN_STARTDATE="2013-10-01"
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## Setup case
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./case.setup
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## EAMxx settings
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./atmchange Scorpio::output_yaml_files=\
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${eamxx_out_files_root}/v1_output/scream_output.Cldfrac.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QcQi.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QvT.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TOMVars.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.VertIntegrals.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.HorizWinds.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QrPsPsl.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.SurfVars_128lev.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TkeOmega.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_min.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_max.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Qv_2m.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.PresLevs.yaml
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./atmchange statefreq=5184 # 2/day
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./atmchange orbital_year=-9999
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## ELM settings
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cp ${elm_nl_file} user_nl_elm
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## Build and submit
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./case.build
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./case.submit

‎run_scripts/SCREAMv1/FourSeasons/run.production.ne1024pg2_screamv1.dyamond1.sh‎

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USER_ENTRY#!/bin/sh -e
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#==============================================#
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# Date: 2022-12-19
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#
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# Description:
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#
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# Submission script used for a 40-day ne1024pg2
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# simulation with the DYAMOND2 configuration.
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#
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#==============================================#
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## Location of eamxx codebase
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eamxx_src=~/Code/scream
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## Location of eamxx output control files
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eamxx_out_files_root=~/Code/scream-docs
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## Location of elm namelist file to use
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elm_nl_file=$eamxx_out_files_root/v1_output/user_nl_elm_20221031_DYAMOND1
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## Some provenance information
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githash_eamxx=`git --git-dir $eamxx_src/.git rev-parse HEAD`
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masterhash_eamxx=`git --git-dir $eamxx_src/.git log -n 1 --pretty=format:"%H" origin/master`
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githash_screamdocs=`git --git-dir $eamxx_out_files_root/.git rev-parse HEAD`
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masterhash_screamdocs=`git --git-dir $eamxx_out_files_root/.git log -n 1 --pretty=format:"%H" origin/master`
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## Job size information
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nnode=1024
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pernode=6
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ntask=$(($pernode * $nnode))
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## Compset and jobname information
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name=4Seasons_DYAMOND1
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compset=F2010-SCREAMv1-DYAMOND1
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res=ne1024pg2_ne1024pg2
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cname=$name.$res.$compset.$githash_eamxx
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## Job submission and compiler information
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queue=batch
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compiler=gnugpu
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machine=summit
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## Create new-case
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rm -rf $cname
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$eamxx_src/cime/scripts/create_newcase --case ${cname} --compset ${compset} --res ${res} \
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-mach ${machine} --compiler ${compiler} --handle-preexisting-dirs u
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## Run settings
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cd $cname
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echo "master hash for EAMxx: $masterhash_eamxx" > GIT_INFO.txt
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echo "master hash for output files: $masterhash_screamdocs" >> GIT_INFO.txt
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./xmlchange JOB_QUEUE=$queue
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./xmlchange JOB_WALLCLOCK_TIME=2:00:00
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./xmlchange STOP_OPTION=nhours
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./xmlchange STOP_N=48
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./xmlchange HIST_N=99999; ./xmlchange HIST_OPTION=nyears ;
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./xmlchange REST_N=48; ./xmlchange REST_OPTION=nhours ;
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./xmlchange AVGHIST_OPTION=nyears
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./xmlchange AVGHIST_N=1
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# Using threads for LAND
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./xmlchange NTASKS=$ntask
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./xmlchange MAX_TASKS_PER_NODE=84
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./xmlchange MAX_MPITASKS_PER_NODE=6
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./xmlchange LND_NTHRDS=14
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# Note, MPI on host
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./xmlchange SCREAM_CMAKE_OPTIONS="SCREAM_NUM_VERTICAL_LEV 128 SCREAM_NUM_TRACERS 10 HOMMEXX_MPI_ON_DEVICE Off"
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./xmlchange PIO_NETCDF_FORMAT="64bit_data"
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./xmlchange RESUBMIT=2
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## Setup case
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./case.setup
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## EAMxx settings
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./atmchange Scorpio::output_yaml_files=\
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${eamxx_out_files_root}/v1_output/scream_output.Cldfrac.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QcQi.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QvT.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TOMVars.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.VertIntegrals.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.HorizWinds.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.QrPsPsl.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.SurfVars_128lev.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TkeOmega.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_min.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_max.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Qv_2m.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.PresLevs.yaml
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./atmchange statefreq=5184 # 2/day
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./atmchange orbital_year=-9999
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## ELM settings
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cp ${elm_nl_file} user_nl_elm
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## Build and submit
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./case.build
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./case.submit

‎run_scripts/SCREAMv1/FourSeasons/run.production.ne1024pg2_screamv1.dyamond2.sh‎

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#!/bin/sh -e
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#==============================================#
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# Date: 2022-12-19
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#
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# Description:
6+
#
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# Submission script used for a 40-day ne1024pg2
8+
# simulation with the DYAMOND2 configuration.
9+
#
10+
#==============================================#
11+
12+
## Location of eamxx codebase
13+
eamxx_src=~/Code/scream
14+
## Location of eamxx output control files
15+
eamxx_out_files_root=~/Code/scream-docs
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## Location of elm namelist file to use
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elm_nl_file=$eamxx_out_files_root/v1_output/user_nl_elm_20221031_DYAMOND1
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## Some provenance information
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githash_eamxx=`git --git-dir $eamxx_src/.git rev-parse HEAD`
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masterhash_eamxx=`git --git-dir $eamxx_src/.git log -n 1 --pretty=format:"%H" origin/master`
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githash_screamdocs=`git --git-dir $eamxx_out_files_root/.git rev-parse HEAD`
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masterhash_screamdocs=`git --git-dir $eamxx_out_files_root/.git log -n 1 --pretty=format:"%H" origin/master`
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## Job size information
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nnode=1024
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pernode=6
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ntask=$(($pernode * $nnode))
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## Compset and jobname information
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name=4Seasons_DYAMOND2
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compset=F2010-SCREAMv1-DYAMOND2
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res=ne1024pg2_ne1024pg2
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cname=$name.$res.$compset.$githash_eamxx
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## Job submission and compiler information
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queue=batch
38+
compiler=gnugpu
39+
machine=summit
40+
41+
## Create new-case
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rm -rf $cname
43+
$eamxx_src/cime/scripts/create_newcase --case ${cname} --compset ${compset} --res ${res} \
44+
-mach ${machine} --compiler ${compiler} --handle-preexisting-dirs u
45+
46+
## Run settings
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cd $cname
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echo "master hash for EAMxx: $masterhash_eamxx" > GIT_INFO.txt
49+
echo "master hash for output files: $masterhash_screamdocs" >> GIT_INFO.txt
50+
./xmlchange JOB_QUEUE=$queue
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./xmlchange JOB_WALLCLOCK_TIME=2:00:00
52+
./xmlchange STOP_OPTION=nhours
53+
./xmlchange STOP_N=48
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./xmlchange HIST_N=99999; ./xmlchange HIST_OPTION=nyears ;
55+
./xmlchange REST_N=48; ./xmlchange REST_OPTION=nhours ;
56+
./xmlchange AVGHIST_OPTION=nyears
57+
./xmlchange AVGHIST_N=1
58+
# Using threads for LAND
59+
./xmlchange NTASKS=$ntask
60+
./xmlchange MAX_TASKS_PER_NODE=84
61+
./xmlchange MAX_MPITASKS_PER_NODE=6
62+
./xmlchange LND_NTHRDS=14
63+
# Note, MPI on host
64+
./xmlchange SCREAM_CMAKE_OPTIONS="SCREAM_NUM_VERTICAL_LEV 128 SCREAM_NUM_TRACERS 10 HOMMEXX_MPI_ON_DEVICE Off"
65+
./xmlchange PIO_NETCDF_FORMAT="64bit_data"
66+
./xmlchange RESUBMIT=2
67+
68+
## Setup case
69+
./case.setup
70+
71+
## EAMxx settings
72+
./atmchange Scorpio::output_yaml_files=\
73+
${eamxx_out_files_root}/v1_output/scream_output.Cldfrac.yaml,\
74+
${eamxx_out_files_root}/v1_output/scream_output.QcQi.yaml,\
75+
${eamxx_out_files_root}/v1_output/scream_output.QvT.yaml,\
76+
${eamxx_out_files_root}/v1_output/scream_output.TOMVars.yaml,\
77+
${eamxx_out_files_root}/v1_output/scream_output.VertIntegrals.yaml,\
78+
${eamxx_out_files_root}/v1_output/scream_output.HorizWinds.yaml,\
79+
${eamxx_out_files_root}/v1_output/scream_output.QrPsPsl.yaml,\
80+
${eamxx_out_files_root}/v1_output/scream_output.SurfVars_128lev.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.TkeOmega.yaml,\
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${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_min.yaml,\
83+
${eamxx_out_files_root}/v1_output/scream_output.Temp_2m_max.yaml,\
84+
${eamxx_out_files_root}/v1_output/scream_output.Qv_2m.yaml,\
85+
${eamxx_out_files_root}/v1_output/scream_output.PresLevs.yaml
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./atmchange statefreq=5184 # 2/day
88+
./atmchange orbital_year=-9999
89+
90+
## ELM settings
91+
cp ${elm_nl_file} user_nl_elm
92+
93+
## Build and submit
94+
./case.build
95+
./case.submit

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