Merge tag 'ctsm5.3.067' into subsetdata-systemtest

(Mostly) fix interim restarts

Author: samsrabin

.github/workflows/check-clm6-aliases.yml

@@ -25,7 +25,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
 
       - name: Checkout submodules
         run: |

.github/workflows/docker-image-build-publish.yml

@@ -42,7 +42,7 @@ jobs:
 
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
 
       # Uses the `docker/login-action` action to log in to the Container registry using the account and password that will publish the packages. Once published, the packages are scoped to the account defined here.
       - name: Log in to the Container registry
@@ -78,7 +78,7 @@ jobs:
 
       # This step generates an artifact attestation for the image, which is an unforgeable statement about where and how it was built. It increases supply chain security for people who consume the image. For more information, see [Using artifact attestations to establish provenance for builds](/actions/security-guides/using-artifact-attestations-to-establish-provenance-for-builds).
       - name: Generate artifact attestation
-        uses: actions/attest-build-provenance@v2
+        uses: actions/attest-build-provenance@e8998f949152b193b063cb0ec769d69d929409be  # v2
         with:
           subject-name: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
           subject-digest: ${{ steps.push.outputs.digest }}

.github/workflows/docker-image-common.yml

@@ -30,14 +30,11 @@ jobs:
     # Sets the permissions granted to the `GITHUB_TOKEN` for the actions in this job.
     permissions:
       contents: read
-      packages: write
-      attestations: write
-      id-token: write
 
     steps:
 
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
 
       # Ensure that the repository part of IMAGE_NAME is lowercase. This is needed because Docker requires image names to be entirely lowercase. Note that the *image name* part, set as IMAGE_BASENAME in the env block above, is *not* converted. This will cause the check-version job to fail if the IMAGE_BASENAME contains capitals. We don't want to silently fix that here; rather, we require the user to specify a lowercase IMAGE_BASENAME.
       - name: Get image name with lowercase repo

.github/workflows/docker-image-get-version.yml

@@ -42,7 +42,7 @@ jobs:
 
     steps:
       - name: Check out repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
 
       - name: Get version number from Dockerfile and check it
         id: get-check-version

.github/workflows/docs-build-and-deploy.yml

@@ -40,13 +40,13 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout repository
-        uses: actions/checkout@v4
+        uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
         with:
           # Get all history, ensuring all branches are available for checkout
           fetch-depth: 0
 
       - name: Setup Pages
-        uses: actions/configure-pages@v5
+        uses: actions/configure-pages@983d7736d9b0ae728b81ab479565c72886d7745b  # v5
 
       # Check out all submodules because we might :literalinclude: something from one
       - name: Checkout all submodules
@@ -60,11 +60,11 @@ jobs:
           ./build_docs_to_publish -d --site-root https://escomp.github.io/CTSM
 
       - name: Upload artifact
-        uses: actions/upload-pages-artifact@v3
+        uses: actions/upload-pages-artifact@0252fc4ba7626f0298f0cf00902a25c6afc77fa8  # v3
         with:
           # Upload publish dir
           path: 'doc/_publish'
 
       - name: Deploy to GitHub Pages
         id: deployment
-        uses: actions/deploy-pages@v4
+        uses: actions/deploy-pages@f33f41b675f0ab2dc5a6863c9a170fe83af3571e  # v4

.github/workflows/docs-common.yml

@@ -21,7 +21,7 @@ jobs:
   build-docs:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
         with:
           fetch-depth: 0
           lfs: true
@@ -35,12 +35,12 @@ jobs:
       # Based on  https://github.com/actions/cache/blob/main/examples.md#python---pip
       - name: Install python
         if: ${{ ! inputs.use_conda }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065  # v5.6.0
         with:
           python-version: '3.13.2'  # needs to be coordinated with version in python/conda_env_ctsm_py.txt
       - name: Cache pip
         if: ${{ ! inputs.use_conda }}
-        uses: actions/cache@v3
+        uses: actions/cache@2f8e54208210a422b2efd51efaa6bd6d7ca8920f  # v3
         with:
           path: ~/.cache/pip
           key: ${{ runner.os }}-pip-${{ hashFiles('doc/ctsm-docs_container/requirements.txt') }}
@@ -54,7 +54,7 @@ jobs:
       # Do this if using conda
       - name: Set up conda environment
         if: ${{ inputs.use_conda }}
-        uses: conda-incubator/setup-miniconda@v3
+        uses: conda-incubator/setup-miniconda@2defc80cc6f4028b1780c50faf08dd505d698976  # v3
         with:
           activate-environment: ${{ inputs.conda_env_name }}
           environment-file: ${{ inputs.conda_env_file }}

.github/workflows/docs-omnibus.yml

@@ -24,7 +24,7 @@ jobs:
 
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
         with:
           fetch-depth: 0
           lfs: true
@@ -36,7 +36,7 @@ jobs:
 
       # Set up conda
       - name: Set up conda environment
-        uses: conda-incubator/setup-miniconda@v3
+        uses: conda-incubator/setup-miniconda@2defc80cc6f4028b1780c50faf08dd505d698976  # v3
         with:
           activate-environment: ctsm_pylib
           environment-file: python/conda_env_ctsm_py.yml

.github/workflows/docs-update-ctsm_pylib.yml

@@ -53,7 +53,7 @@ jobs:
     needs: test-build-docs-ctsm_pylib
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
 
       - name: Create issue
         uses: JasonEtco/create-an-issue@1b14a70e4d8dc185e5cc76d3bec9eab20257b2c5

.github/workflows/docs-update-dependency-common.yml

@@ -27,7 +27,7 @@ jobs:
 
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
         with:
           fetch-depth: 0
           lfs: true
@@ -38,7 +38,7 @@ jobs:
           bin/git-fleximod update -o
 
       - name: Set up conda environment
-        uses: conda-incubator/setup-miniconda@v3
+        uses: conda-incubator/setup-miniconda@2defc80cc6f4028b1780c50faf08dd505d698976  # v3
         with:
           activate-environment: ${{ inputs.conda_env_name }}
           environment-file: ${{ inputs.conda_env_file }}
@@ -53,7 +53,7 @@ jobs:
   makefile-method:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
         with:
           fetch-depth: 0
           lfs: true
@@ -64,7 +64,7 @@ jobs:
           bin/git-fleximod update -o
 
       - name: Set up conda environment
-        uses: conda-incubator/setup-miniconda@v3
+        uses: conda-incubator/setup-miniconda@2defc80cc6f4028b1780c50faf08dd505d698976  # v3
         with:
           activate-environment: ${{ inputs.conda_env_name }}
           environment-file: ${{ inputs.conda_env_file }}

.github/workflows/docs-update-doc-builder.yml

@@ -28,7 +28,7 @@ jobs:
 
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683  # v4.2.2
         with:
           fetch-depth: 0
           lfs: true