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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -134,6 +134,22 @@ Analysis runtime: ~0.5 min after data download (~2GB).
134134- Tests: ` Rscript -e 'testthat::test_dir("tests/testthat")' `
135135- Reproducibility details (expected outputs, network requirements): see ` REPRODUCIBILITY.md `
136136
137+ ## Data and Code Availability
138+ - Source data: GEO accession [ GSE152075] ( https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE152075 )
139+ - Analysis code: this repository (MIT licence)
140+ - Frozen software environment: ` renv.lock `
141+ - Key derived outputs: ` results/figures/ ` and ` results/tables/ `
142+
143+ ## Peer Review Checklist
144+ Run from the repository root:
145+ ``` sh
146+ Rscript 000_install_dependencies.R
147+ Rscript run_all.R
148+ Rscript -e ' renv::status()'
149+ Rscript dev/lint.R
150+ Rscript -e ' testthat::test_dir("tests/testthat")'
151+ ```
152+
137153## Citation Metadata
138154- Zenodo DOI: ` 10.5281/zenodo.18432519 `
139155- For citation tooling, see ` CITATION.cff `
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