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Clarify publication figure legend comment
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scripts/08_publication_figures.py

Lines changed: 1 addition & 1 deletion
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@@ -32,7 +32,7 @@ def make_figure(adata):
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legend_fontoutline=2, frameon=False, ax=ax_a, show=False, title="")
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ax_a.set_title("A Leiden Clusters", fontsize=12, fontweight="bold", loc="left")
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# B: UMAP by cell type (legend on data to avoid overlap with panel C)
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# B: UMAP by cell type; panel C carries the matching colour key.
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ax_b = fig.add_subplot(gs[0, 1])
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present_types = adata.obs["cell_type"].cat.categories.tolist()
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palette = [PALETTE.get(ct, "#AAAAAA") for ct in present_types]

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