-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathmodel
More file actions
60 lines (48 loc) · 2.19 KB
/
Copy pathmodel
File metadata and controls
60 lines (48 loc) · 2.19 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
import json
import numpy as np
import torch
import torch.nn as nn
import re
from modules.CTM import ContextualModule1D
from gensim.models import Word2Vec
from modules.encoder_decoder import CCIN
from modules.visual_extractor import VisualExtractor
from modules.attention import ClsAttention
class CCIN(nn.Module):
def __init__(self, args, tokenizer, bias=False):
super(CCIN, self).__init__()
self.args = args
self.tokenizer = tokenizer
self.visual_extractor = VisualExtractor(args)
self.encoder_decoder = BaseCMN(args, tokenizer)
if args.dataset_name == 'iu_xray':
self.forward = self.forward_iu_xray
else:
self.forward = self.forward_mimic_cxr
def __str__(self):
model_parameters = filter(lambda p: p.requires_grad, self.parameters())
params = sum([np.prod(p.size()) for p in model_parameters])
return super().__str__() + '\nTrainable parameters: {}'.format(params)
def forward_iu_xray(self, images, targets=None, mode='train', update_opts={}):
att_feats_0, fc_feats_0 = self.visual_extractor(images[:, 0])
att_feats_1, fc_feats_1 = self.visual_extractor(images[:, 1])
fc_feats = torch.cat((fc_feats_0, fc_feats_1), dim=1)
att_feats = torch.cat((att_feats_0, att_feats_1), dim=1)
if mode == 'train':
output = self.encoder_decoder(fc_feats, att_feats, targets, mode='forward')
return output
elif mode == 'sample':
output, output_probs = self.encoder_decoder(fc_feats, att_feats, mode='sample', update_opts=update_opts)
return output, output_probs
else:
raise ValueError
def forward_mimic_cxr(self, images, targets=None, mode='train', update_opts={}):
att_feats, fc_feats = self.visual_extractor(images)
if mode == 'train':
output = self.encoder_decoder(fc_feats, att_feats, targets, mode='forward')
return output
elif mode == 'sample':
output, output_probs = self.encoder_decoder(fc_feats, att_feats, mode='sample', update_opts=update_opts)
return output, output_probs
else:
raise ValueError