Skip to content

NMDC value sets disappeared from 2025-08-19 #1642

@turbomam

Description

@turbomam

I made this release last week: https://github.com/EnvironmentOntology/envo/releases/tag/v2025-08-19. Several of you reviewed that and shared helpful insights, which I either addressed or for which I opened new issues.

The release includes:

But I don’t actually see the NMDC value sets in OLS now, or even in https://github.com/EnvironmentOntology/envo/blob/master/envo.owl
Some of the older ones are still in Ontobee: https://ontobee.org/search?ontology=&keywords=nmdc&submit=Search+terms

Maybe I forgot to build or use this: nmdc_env_context_subset_membership.owl

Here are mentions of that artifact in EnvO: https://github.com/search?q=repo%3AEnvironmentOntology%2Fenvo%20nmdc_env_context_subset_membership&type=code

It looks like that is built here: https://github.com/search?q=org%3Amicrobiomedata%20robot_templates%2Fnmdc_env_context_subset_membership.owl&type=code

Metadata

Metadata

Assignees

Labels

No labels
No labels

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions