Build failing with py-numpy-2.3.3

[rsaxena829]

Hello,

I’ve been trying to compile Exawind, AMR-Wind and NALU-Wind on the Derecho cluster within my Spack environment (/glade/work/rsaxena/exawind/exawind-manager/environments/myenv).

The Spack concretize step was successful, but when I do
spack install --verbose
It fails every time trying to install py-numpy-2.3.3. Something to do with missing header files?
I will include the error as both a code snippet and screenshot in case colors make it more readable.

==> No binary for py-numpy-2.3.3-w2vcjddttnsqgx4fxrj5sn2l6l2psffe found: installing from source
==> Installing py-numpy-2.3.3-w2vcjddttnsqgx4fxrj5sn2l6l2psffe [60/64]
==> Warning: /glade/work/rsaxena/exawind/exawind-manager/spack/lib/spack/spack/schema/environment.py:54: when setting environment variable CRAYPE_VERSION=1: value is of type `int`, but `str` was expected. This is deprecated and will be an error in Spack v1.0
==> Using cached archive: /glade/u/home/rsaxena/.spack_downloads/_source-cache/archive/dd/ddc7c39727ba62b80dfdbedf400d1c10ddfa8eefbd7ec8dcb118be8b56d31029.tar.gz
==> Applied patch /glade/work/rsaxena/exawind/exawind-manager/.cache/package_repos/fncqgg4/repos/spack_repo/builtin/packages/py_numpy/check_executables.patch
==> py-numpy: Executing phase: 'install'
==> [2025-09-24-08:54:53.836992] Find (max depth = None): ['/glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5/Linux_x86_64/25.7/compilers/lib'] ['libblas.so', 'liblapack.so', 'libnvf.so']
==> [2025-09-24-08:54:53.837471] Find complete: ['/glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5/Linux_x86_64/25.7/compilers/lib'] ['libblas.so', 'liblapack.so', 'libnvf.so']
==> [2025-09-24-08:54:53.837681] Find (max depth = None): ['/glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5/include'] ['*.h', '*.hpp', '*.hxx', '*.hh', '*.H', '*.txx', '*.tcc', '*.icc', '*.mod', '*.inc']
==> [2025-09-24-08:54:53.837862] find must skip /glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5/include: [Errno 2] No such file or directory: '/glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5/include'
==> [2025-09-24-08:54:53.837910] Find complete: ['/glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5/include'] ['*.h', '*.hpp', '*.hxx', '*.hh', '*.H', '*.txx', '*.tcc', '*.icc', '*.mod', '*.inc']
==> Error: NoHeadersError: Unable to locate nvhpc headers in /glade/work/rsaxena/exawind/exawind-manager/spack/opt/spack/linux-x86_64_v3/nvhpc-25.7-o3wzcg2uvsnlhi7uqim33zs6gktqv3p5

/glade/work/rsaxena/exawind/exawind-manager/.cache/package_repos/fncqgg4/repos/spack_repo/builtin/packages/py_numpy/package.py:378, in blas_lapack_site_cfg:
        375                f.write("rpath = {0}\n".format(dirs))
        376
        377        blas_libs = spec["blas"].libs
  >>    378        blas_headers = spec["blas"].headers
        379
        380        lapack_libs = spec["lapack"].libs
        381        lapack_headers = spec["lapack"].headers

See build log for details:
  /glade/work/rsaxena/exawind/exawind-manager/stage/spack-stage-py-numpy-2.3.3-w2vcjddttnsqgx4fxrj5sn2l6l2psffe/spack-build-out.txt

==> Warning: Skipping build of py-cftime-1.6.4-lk6pni2pkqvz3zhqexsxqutooetho7i7 since py-numpy-2.3.3-w2vcjddttnsqgx4fxrj5sn2l6l2psffe failed
==> Warning: Skipping build of py-netcdf4-1.7.2-jctxnfptfh4dwwo5woqoxicix6jfdpxt since py-cftime-1.6.4-lk6pni2pkqvz3zhqexsxqutooetho7i7 failed
==> Warning: Skipping build of amr-wind-main-k62ehihjiklqkk2554xwa5rrc2ntaxrn since py-netcdf4-1.7.2-jctxnfptfh4dwwo5woqoxicix6jfdpxt failed
==> Warning: Skipping build of exawind-master-o7krt23nmq3loy32g6ecnxzj3n5ygkit since amr-wind-main-k62ehihjiklqkk2554xwa5rrc2ntaxrn failed
==> Removing failure mark on py-numpy-2.3.3-w2vcjddttnsqgx4fxrj5sn2l6l2psffe
==> Removing failure mark on py-cftime-1.6.4-lk6pni2pkqvz3zhqexsxqutooetho7i7
==> Removing failure mark on py-netcdf4-1.7.2-jctxnfptfh4dwwo5woqoxicix6jfdpxt
==> Removing failure mark on amr-wind-main-k62ehihjiklqkk2554xwa5rrc2ntaxrn
==> Removing failure mark on exawind-master-o7krt23nmq3loy32g6ecnxzj3n5ygkit
==> Error: amr-wind-main-k62ehihjiklqkk2554xwa5rrc2ntaxrn: Package was not installed
==> Error: exawind-master-o7krt23nmq3loy32g6ecnxzj3n5ygkit: Package was not installed
==> Error: Installation request failed.  Refer to reported errors for failing package(s).