.ruff.toml

extend-exclude = ["dev/docker_data/get-pip_23.0.1.py"]
target-version = "py310"

[format]
line-ending = "auto"  # proposed setting to add next release: line-ending = "lf"

[lint]
extend-select = ["A", "C4", "D", "EM", "F541", "G", "I", "ICN", "NPY", "PL", "RET", "RSE", "RUF", "Q", "T20", "UP032", "W"]  # proposed rules to add next release cycle: ["B904", "LOG007", "TRY002", "TRY201", "TRY400", "TRY401"]
external = ["T20"]  # Don't autoremove 'noqa` comments for these rules

[lint.per-file-ignores]
"CPAC/func_preproc/func_preproc.py" = ["E402"]
"CPAC/utils/sklearn.py" = ["RUF003"]
"CPAC/utils/tests/old_functions.py" = ["C", "D", "E", "EM", "PLW", "RET"]
"CPAC/utils/utils.py" = ["T201"]  # until `repickle` is removed
"dev/circleci_data/conftest.py" = ["F401"]
"setup.py" = ["D1"]

[lint.flake8-import-conventions.extend-aliases]
"CPAC.pipeline.cpac_group_runner" = "cgr"
"nibabel" = "nib"
"nipype.interfaces.io" = "nio"
"networkx" = "nx"
"pkg_resources" = "p"
"CPAC.pipeline.nipype_pipeline_engine" = "pe"

[lint.isort]
combine-as-imports = true
force-sort-within-sections = true
known-first-party = ["CPAC"]
no-lines-before = ["collab", "other-first-party", "local-folder"]
order-by-type = false
section-order = ["future", "standard-library", "third-party", "collab", "other-first-party", "first-party", "local-folder"]

[lint.isort.sections]
"collab" = ["nibabel", "nilearn", "nipype", "PyBASC", "pybids", "scipy", "spython"]
"other-first-party" = ["bids2table", "flowdump", "indi_aws", "indi_schedulers", "PyPEER"]

[lint.pydocstyle]
convention = "numpy"
ignore-decorators = ["CPAC.utils.docs.docstring_parameter"]

[lint.pylint]
max-args = 10
max-branches = 50
max-returns = 12
max-statements = 100