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Merge pull request #2184 from FCP-INDI/fs-abcd-preproc-outputs
➖ removed extra unused outputs from the list
2 parents 37aef2e + 49bd095 commit 4bdd6c4

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CHANGELOG.md

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@@ -45,6 +45,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
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- `ABCD-HCP`
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- `fMRIPrep-LTS`
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- Typehinting support for Python < 3.10.
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- Extra outputs listed in `freesurfer_abcd_preproc`.
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- Resource `space-template_desc-T1w_mask`
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- as output from FNIRT registration.
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- as inputs from Nodeblocks requesting it and, replaced with `space-template_desc-brain_mask`.

CPAC/anat_preproc/anat_preproc.py

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@@ -2764,24 +2764,6 @@ def brain_extraction_temp_T2(wf, cfg, strat_pool, pipe_num, opt=None):
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"desc-restore-brain_T1w",
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"desc-ABCDpreproc_T1w",
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"pipeline-fs_desc-fast_biasfield",
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"pipeline-fs_hemi-L_desc-surface_curv",
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"pipeline-fs_hemi-R_desc-surface_curv",
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"pipeline-fs_hemi-L_desc-surfaceMesh_pial",
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"pipeline-fs_hemi-R_desc-surfaceMesh_pial",
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"pipeline-fs_hemi-L_desc-surfaceMesh_smoothwm",
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"pipeline-fs_hemi-R_desc-surfaceMesh_smoothwm",
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"pipeline-fs_hemi-L_desc-surfaceMesh_sphere",
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"pipeline-fs_hemi-R_desc-surfaceMesh_sphere",
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"pipeline-fs_hemi-L_desc-surfaceMap_sulc",
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"pipeline-fs_hemi-R_desc-surfaceMap_sulc",
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"pipeline-fs_hemi-L_desc-surfaceMap_thickness",
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"pipeline-fs_hemi-R_desc-surfaceMap_thickness",
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"pipeline-fs_hemi-L_desc-surfaceMap_volume",
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"pipeline-fs_hemi-R_desc-surfaceMap_volume",
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"pipeline-fs_hemi-L_desc-surfaceMesh_white",
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"pipeline-fs_hemi-R_desc-surfaceMesh_white",
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"pipeline-fs_wmparc",
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"freesurfer-subject-dir",
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],
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)
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def freesurfer_abcd_preproc(wf, cfg, strat_pool, pipe_num, opt=None):

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