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[pre-commit.ci] auto fixes from pre-commit.com hooks
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CPAC/registration/registration.py

Lines changed: 10 additions & 10 deletions
Original file line numberDiff line numberDiff line change
@@ -3116,7 +3116,9 @@ def overwrite_transform_anat_to_template(wf, cfg, strat_pool, pipe_num, opt=None
31163116
merge_xfms, "merged_file", fsl_apply_warp_t1_to_template, "field_file"
31173117
)
31183118

3119-
concat_match_fov = pe.Node(interface=fsl.ConvertWarp(), name=f"concat_match_fov_{pipe_num}")
3119+
concat_match_fov = pe.Node(
3120+
interface=fsl.ConvertWarp(), name=f"concat_match_fov_{pipe_num}"
3121+
)
31203122
concat_match_fov.inputs.relwarp = True
31213123

31223124
wf.connect(match_fovs_T1w, "out_matrix_file", concat_match_fov, "premat")
@@ -3126,8 +3128,7 @@ def overwrite_transform_anat_to_template(wf, cfg, strat_pool, pipe_num, opt=None
31263128

31273129
# Node to concatenate the inverse warp with the FOV matrix
31283130
concat_match_fov_inv = pe.Node(
3129-
interface=fsl.ConvertWarp(),
3130-
name=f"concat_match_fov_inv_{pipe_num}"
3131+
interface=fsl.ConvertWarp(), name=f"concat_match_fov_inv_{pipe_num}"
31313132
)
31323133
concat_match_fov_inv.inputs.relwarp = True
31333134

@@ -3146,15 +3147,16 @@ def overwrite_transform_anat_to_template(wf, cfg, strat_pool, pipe_num, opt=None
31463147
# TODO connect T1wRestoreBrain, check T1wRestoreBrain quality
31473148
node, out = strat_pool.get_data(["desc-restore-brain_T1w", "desc-preproc_T1w"])
31483149

3149-
wf.connect(
3150-
node, out, fsl_apply_warp_t1_brain_to_template, "in_file"
3151-
)
3150+
wf.connect(node, out, fsl_apply_warp_t1_brain_to_template, "in_file")
31523151

31533152
node, out = strat_pool.get_data("T1w-brain-template")
31543153
wf.connect(node, out, fsl_apply_warp_t1_brain_to_template, "ref_file")
31553154

31563155
wf.connect(
3157-
concat_match_fov, "out_file", fsl_apply_warp_t1_brain_to_template, "field_file"
3156+
concat_match_fov,
3157+
"out_file",
3158+
fsl_apply_warp_t1_brain_to_template,
3159+
"field_file",
31583160
)
31593161

31603162
fsl_apply_warp_t1_brain_mask_to_template = pe.Node(
@@ -3166,9 +3168,7 @@ def overwrite_transform_anat_to_template(wf, cfg, strat_pool, pipe_num, opt=None
31663168

31673169
node, out = strat_pool.get_data("space-T1w_desc-brain_mask")
31683170

3169-
wf.connect(
3170-
node, out, fsl_apply_warp_t1_brain_mask_to_template, "in_file"
3171-
)
3171+
wf.connect(node, out, fsl_apply_warp_t1_brain_mask_to_template, "in_file")
31723172

31733173
node, out = strat_pool.get_data("T1w-brain-template-mask")
31743174
wf.connect(node, out, fsl_apply_warp_t1_brain_mask_to_template, "ref_file")

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