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Description
Related problem
The two res-2 template resources under FNIRT registration in the pipeline configuration are in the wrong place, and often throw errors when users are not using the ABCD pipeline-style Freesurfer prep workflows.
These are only used in the fnirt_based_brain_extraction nodeblock, which is only used for the Freesurfer prep workflow mentioned.
Proposed feature
These parameters are not ideal and are too specific, and need a refactor.
But in the meantime, these should be moved under the abcd_prefreesurfer_prep tier.
Acceptance criteria
- The
ref_mask_res-2andT1w_template_res-2fields are moved out of registration and into surface.
Alternatives
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Additional context
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✅ Done