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🐛 PyPI's <code>bids_validator</code> does not include CLI

bug

user-reported

Status: Closed (completed).

#2110 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Jun 12, 2024

🐛 User-provided brain masks are not being read in to the resource list

bug

Status: Closed (completed).

#2112 In FCP-INDI/C-PAC;

· by nimzodisaster was closed on May 25, 2024

🐛 Possibly safer to use <code>-ort</code> in <code>3dTProject</code> for <code>SpikeRegression</code> instead

2 - High Priority

bug

question

Status: Closed (completed).

#2137 In FCP-INDI/C-PAC;

· by sgiavasis was closed on Sep 12, 2025

✨ Nifti header orientation checks and decisions for downstream resources

enhancement

Status: Closed (completed).

#2138 In FCP-INDI/C-PAC;

· by sgiavasis was closed on Sep 12, 2025

📝 Document maintenance status in README

docs

enhancement

NMIND

Status: Closed (completed).

Task

#2222 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Nov 11, 2025

🐛 <code>Cannot convert &lt;class 'bytes'&gt; to datetime</code>

3 - Critical

bug

developissue on `develop` branchissue on `develop` branch

Status: Closed (completed).

Bug

#2244 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Sep 12, 2025

🐛 <code>AttributeError: 'ResourcePool' object has no attribute 'motion_correct_tool'</code>

3 - Critical

bug

developissue on `develop` branchissue on `develop` branch

Status: Closed (completed).

Bug

#2245 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Jun 18, 2025

🐛 abcd-options: missing <code>space-bold_desc-brain_mask</code>

3 - Critical

bug

developissue on `develop` branchissue on `develop` branch

nodeblock design

Status: Closed (completed).

Bug

#2248 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Sep 12, 2025

🐛 <code>fsl_prepare_fieldmap</code> crashing

3 - Critical

bug

developissue on `develop` branchissue on `develop` branch

nodeblock design

Status: Closed (completed).

Bug

#2249 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Sep 12, 2025

🐛 <code>TypeError: Cannot subtract tz-naive and tz-aware datetime-like objects.</code>

2 - High Priority

bug

developissue on `develop` branchissue on `develop` branch

Status: Closed (completed).

Bug

#2251 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Nov 11, 2025

🐛 <code>?_surf_reho</code>: <code>IndexError: too many indices for array: array is 1-dimensional, but 2 were indexed</code>

2 - High Priority

bug

developissue on `develop` branchissue on `develop` branch

preconfig: abcd-options

Status: Closed (completed).

Bug

#2257 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Sep 12, 2025

🐛 <code>input mask must have at least 1 voxel</code>

2 - High Priority

bug

developissue on `develop` branchissue on `develop` branch

preconfig: abcd-options

Status: Closed (completed).

Bug

#2258 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Sep 12, 2025

🐛 <code>3dcalc:</code> […] <code>FATAL ERROR: dataset</code> […] <code>differs in size</code> […] <code>from others</code>

bug

developissue on `develop` branchissue on `develop` branch

preconfig: ccs-options

Status: Closed (completed).

Bug

#2279 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Sep 12, 2025

🐛 when using FreeSurfer-ABCD for brain masking, correct_restore_brain_intensity_abcd turns on automatically

bug

Status: Closed (completed).

#2206 In FCP-INDI/C-PAC;

· by birajstha was closed on Apr 7, 2025

🥅 Throw exit status <code>1</code> when crashing gracefully

engineInternal implementation changes that may not be visible to users.Internal implementation changes that may not be visible to users.

enhancement

improvement

Status: Merged (completed).

FCP-INDI/C-PACnumber 2020

#2020 In FCP-INDI/C-PAC;

· by shnizzedy was closed on May 22, 2024

🐛 Fix double-logging

bug

developissue on `develop` branchissue on `develop` branch

Status: Merged (completed).

FCP-INDI/C-PACnumber 2136

#2136 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Aug 16, 2024

🚨 Lint <code>CPAC/alff/utils.py</code> and <code>CPAC/qc/xcp.py</code>

style

Status: Merged (completed).

FCP-INDI/C-PACnumber 2088

#2088 In FCP-INDI/C-PAC;

· by shnizzedy was closed on May 23, 2024

📝 Update XCP-QC docstring

docs

RBChttps://github.com/PennLINC/RBChttps://github.com/PennLINC/RBC

user-reported

Status: Merged (completed).

FCP-INDI/C-PACnumber 2089

#2089 In FCP-INDI/C-PAC;

· by shnizzedy was closed on May 23, 2024

📦️ PEP 518: Set <code>[build-system]</code> in <code>pyproject.toml</code>

devops

pythonPull requests that update Python codePull requests that update Python code

Status: Merged (completed).

FCP-INDI/C-PACnumber 2111

#2111 In FCP-INDI/C-PAC;

· by shnizzedy was closed on May 22, 2024

Remove dead code in timeseries_analysis.py

Status: Merged (completed).

FCP-INDI/C-PACnumber 2094

#2094 In FCP-INDI/C-PAC;

· by ReinderVosDeWael was closed on May 9, 2024

🚸 Coerce ints in data config <code>subject_id</code> and <code>unique_id</code> values to strings

data config

user-reported

Status: Merged (completed).

FCP-INDI/C-PACnumber 2147

#2147 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Oct 9, 2024

👷 Automate lite integration and regression tests

Status: Merged (completed).

FCP-INDI/C-PACnumber 2162

#2162 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Apr 17, 2025

🐛 Patch <code>NetCorr._list_outputs</code>

bug

Status: Merged (completed).

FCP-INDI/C-PACnumber 2163

#2163 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Nov 21, 2024

👽️ Update Dockerfile <code>LABEL</code>s re: deprecated <code>LegacyKeyValueFormat</code>

devops

Status: Merged (completed).

FCP-INDI/C-PACnumber 2195

#2195 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Mar 13, 2025

🐛 Fix <code>NameError: [!] Output name "desc-reorient_bold" in the block function does not match the outputs list ['desc-preproc_bold', 'desc-stc_bold', 'bold'] in Node Block "apply_blip_to_timeseries_separately"</code>

bug

Status: Merged (completed).

FCP-INDI/C-PACnumber 2226

#2226 In FCP-INDI/C-PAC;

· by shnizzedy was closed on Apr 25, 2025