diff --git a/CHANGELOG.md b/CHANGELOG.md index fa96ca94a..fa2ece42f 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -45,6 +45,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - `ABCD-HCP` - `fMRIPrep-LTS` - Typehinting support for Python < 3.10. +- Extra outputs listed in `freesurfer_abcd_preproc`. - Resource `space-template_desc-T1w_mask` - as output from FNIRT registration. - as inputs from Nodeblocks requesting it and, replaced with `space-template_desc-brain_mask`. diff --git a/CPAC/anat_preproc/anat_preproc.py b/CPAC/anat_preproc/anat_preproc.py index a561f8e07..eda6ecf62 100644 --- a/CPAC/anat_preproc/anat_preproc.py +++ b/CPAC/anat_preproc/anat_preproc.py @@ -2764,24 +2764,6 @@ def brain_extraction_temp_T2(wf, cfg, strat_pool, pipe_num, opt=None): "desc-restore-brain_T1w", "desc-ABCDpreproc_T1w", "pipeline-fs_desc-fast_biasfield", - "pipeline-fs_hemi-L_desc-surface_curv", - "pipeline-fs_hemi-R_desc-surface_curv", - "pipeline-fs_hemi-L_desc-surfaceMesh_pial", - "pipeline-fs_hemi-R_desc-surfaceMesh_pial", - "pipeline-fs_hemi-L_desc-surfaceMesh_smoothwm", - "pipeline-fs_hemi-R_desc-surfaceMesh_smoothwm", - "pipeline-fs_hemi-L_desc-surfaceMesh_sphere", - "pipeline-fs_hemi-R_desc-surfaceMesh_sphere", - "pipeline-fs_hemi-L_desc-surfaceMap_sulc", - "pipeline-fs_hemi-R_desc-surfaceMap_sulc", - "pipeline-fs_hemi-L_desc-surfaceMap_thickness", - "pipeline-fs_hemi-R_desc-surfaceMap_thickness", - "pipeline-fs_hemi-L_desc-surfaceMap_volume", - "pipeline-fs_hemi-R_desc-surfaceMap_volume", - "pipeline-fs_hemi-L_desc-surfaceMesh_white", - "pipeline-fs_hemi-R_desc-surfaceMesh_white", - "pipeline-fs_wmparc", - "freesurfer-subject-dir", ], ) def freesurfer_abcd_preproc(wf, cfg, strat_pool, pipe_num, opt=None):