Related problem
The filenames are currently not following any consistent pattern (the macaque files are nearly in BIDS):
atlases/label
βββ Human
βΒ Β βββ aal_mask_pad.nii.gz
βΒ Β βββ CC200.nii.gz
βΒ Β βββ CC400.nii.gz
βΒ Β βββ csf_mask_xtedit.nii.gz
βΒ Β βββ ez_mask_pad.nii.gz
βΒ Β βββ ho_mask_pad.nii.gz
βΒ Β βββ Mask_ABIDE_85Percent_GM.nii.gz
βΒ Β βββ PNAS_Smith09_rsn10.nii.gz
βΒ Β βββ rois_3mm.nii.gz
βΒ Β βββ tt_mask_pad.nii.gz
βββ Macaque
βββ MacaqueYerkes19_T1w_0.5mm_brain_mask.nii.gz
βββ MacaqueYerkes19_T1w_0.5mm_brain.nii.gz
βββ MacaqueYerkes19_T1w_0.5mm.nii.gz
βββ MacaqueYerkes19_T1w_1.0mm_brain_mask.nii.gz
βββ MacaqueYerkes19_T1w_1.0mm_brain.nii.gz
βββ MacaqueYerkes19_T1w_1.0mm.nii.gz
βββ MacaqueYerkes19_T1w_2mm_brain_mask.nii.gz
βββ MacaqueYerkes19_T1w_2mm_brain.nii.gz
βββ MacaqueYerkes19_T1w_2mm.nii.gz
Proposed feature
Rename all these images following the BIDS specification
Acceptance criteria
Alternatives
No response
Additional context
- I think it would be great to also include sidecars like in Neuroparc's specification, but I think that's a follow-up to this, not necessary to resolve this issue.
- For the renaming acceptance criterion, I think it would be useful to make a CSV (or some other format) file that handles the mappings, so it's both machine- and human-readable without a lot of digging.
Related problem
The filenames are currently not following any consistent pattern (the macaque files are nearly in BIDS):
Proposed feature
Rename all these images following the BIDS specification
Acceptance criteria
Alternatives
No response
Additional context